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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

22 rows where Is_annotated = 0, Is_protein_coding_sequence = 0 and Species_name = "Thraustochytrium"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
AX951565 Thraustochytrium 55.123339658444 1054.0 observed 0 0
BD376024 Thraustochytrium 55.3129548762737 687.0 observed 0 0
BD376027 Thraustochytrium 55.123339658444 1054.0 observed 0 0
CQ891235 Thraustochytrium 60.7449856733524 1047.0 observed 0 0
CS020075 Thraustochytrium 55.1000953288846 1049.0 observed 0 0
CS160843 Thraustochytrium 55.1000953288846 1049.0 observed 0 0
DD467617 Thraustochytrium 55.1000953288846 1049.0 observed 0 0
DJ418293 Thraustochytrium 55.1000953288846 1049.0 observed 0 0
HC475504 Thraustochytrium 55.1000953288846 1049.0 observed 0 0
HC475696 Thraustochytrium 55.1000953288846 1049.0 observed 0 0
HC475888 Thraustochytrium 55.1000953288846 1049.0 observed 0 0
HC476080 Thraustochytrium 55.1000953288846 1049.0 observed 0 0
HC476272 Thraustochytrium 55.1000953288846 1049.0 observed 0 0
HC476464 Thraustochytrium 55.1000953288846 1049.0 observed 0 0
HC476656 Thraustochytrium 55.1000953288846 1049.0 observed 0 0
HC482015 Thraustochytrium 55.1000953288846 1049.0 observed 0 0
HC482207 Thraustochytrium 55.1000953288846 1049.0 observed 0 0
HC491171 Thraustochytrium 55.1000953288846 1049.0 observed 0 0
HV338450 Thraustochytrium 55.1000953288846 1049.0 observed 0 0
HW603262 Thraustochytrium 55.1000953288846 1049.0 observed 0 0
LF948703 Thraustochytrium 55.1000953288846 1049.0 observed 0 0
MA815869 Thraustochytrium 55.1000953288846 1049.0 observed 0 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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