Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
84 rows where Is_annotated = 0, Is_protein_coding_sequence = 1 and Sequence_length = "720.0"
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Suggested facets: GC_content
Species_name 15
- Aequorea victoria 48
- Photobacterium profundum 6
- Magnetococcus marinus mc-1 5
- Shewanella oneidensis 5
- Renilla reniformis 4
- Aequorea 3
- Aequorea coerulescens 3
- Rhodopirellula baltica 3
- Aliivibrio fischeri es114 1
- Archaeoglobus fulgidus dsm 4304 1
- Ostreococcus tauri 1
- Thiocapsa roseopersicina 1
- Vibrio cholerae o1 biovar el tor str. n16961 1
- Vibrio parahaemolyticus 1
- Vibrio parahaemolyticus rimd 2210633 1
Sequence_status 1
- observed 84
Is_protein_coding_sequence 1
- 1 · 84 ✖
Is_annotated 1
- - · 84 ✖
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| AX207710 | Aequorea victoria | 61.3888888888889 | 720.0 | observed | 1 | 0 |
| AX233586 | Aequorea victoria | 61.3888888888889 | 720.0 | observed | 1 | 0 |
| AX361574 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| AX666128 | Renilla reniformis | 62.2222222222222 | 720.0 | observed | 1 | 0 |
| AX815521 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| AX815525 | Aequorea victoria | 61.9444444444444 | 720.0 | observed | 1 | 0 |
| AX815527 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| AX815534 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| AX815535 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| AX815536 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| BD136947 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| BD136953 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| BD374385 | Aequorea victoria | 61.3888888888889 | 720.0 | observed | 1 | 0 |
| CQ897010 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| CS499892 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| DD087894 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| DD089763 | Aequorea victoria | 43.1944444444444 | 720.0 | observed | 1 | 0 |
| DD116165 | Renilla reniformis | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| DD122476 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| DD122477 | Aequorea victoria | 62.0833333333333 | 720.0 | observed | 1 | 0 |
| DD122478 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| DD122479 | Aequorea victoria | 61.3888888888889 | 720.0 | observed | 1 | 0 |
| DD173687 | Aequorea victoria | 43.1944444444444 | 720.0 | observed | 1 | 0 |
| DD258738 | Renilla reniformis | 40.4166666666667 | 720.0 | observed | 1 | 0 |
| DD400879 | Aequorea victoria | 43.1944444444444 | 720.0 | observed | 1 | 0 |
| DD420090 | Aequorea victoria | 61.9444444444444 | 720.0 | observed | 1 | 0 |
| DD420091 | Aequorea victoria | 62.2222222222222 | 720.0 | observed | 1 | 0 |
| DD431503 | Aequorea victoria | 61.9444444444444 | 720.0 | observed | 1 | 0 |
| DD431504 | Aequorea victoria | 62.2222222222222 | 720.0 | observed | 1 | 0 |
| DJ381358 | Renilla reniformis | 40.4166666666667 | 720.0 | observed | 1 | 0 |
| FW300700 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| FW343413 | Aequorea | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| FW577224 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| GM003376 | Aequorea victoria | 43.1944444444444 | 720.0 | observed | 1 | 0 |
| HB878282 | Shewanella oneidensis | 49.0277777777778 | 720.0 | observed | 1 | 0 |
| HB878883 | Rhodopirellula baltica | 56.3888888888889 | 720.0 | observed | 1 | 0 |
| HB878971 | Shewanella oneidensis | 49.0277777777778 | 720.0 | observed | 1 | 0 |
| HB879073 | Photobacterium profundum | 46.5277777777778 | 720.0 | observed | 1 | 0 |
| HB879075 | Photobacterium profundum | 43.4722222222222 | 720.0 | observed | 1 | 0 |
| HB926988 | Magnetococcus marinus mc-1 | 49.5833333333333 | 720.0 | observed | 1 | 0 |
| HB943848 | Magnetococcus marinus mc-1 | 49.5833333333333 | 720.0 | observed | 1 | 0 |
| HC729247 | Ostreococcus tauri | 57.9166666666667 | 720.0 | observed | 1 | 0 |
| HC931934 | Vibrio parahaemolyticus | 49.0277777777778 | 720.0 | observed | 1 | 0 |
| HC933245 | Shewanella oneidensis | 49.0277777777778 | 720.0 | observed | 1 | 0 |
| HC935603 | Rhodopirellula baltica | 56.3888888888889 | 720.0 | observed | 1 | 0 |
| HC935691 | Shewanella oneidensis | 49.0277777777778 | 720.0 | observed | 1 | 0 |
| HC935793 | Photobacterium profundum | 46.5277777777778 | 720.0 | observed | 1 | 0 |
| HC935795 | Photobacterium profundum | 43.4722222222222 | 720.0 | observed | 1 | 0 |
| HC936292 | Rhodopirellula baltica | 56.3888888888889 | 720.0 | observed | 1 | 0 |
| HC936380 | Shewanella oneidensis | 49.0277777777778 | 720.0 | observed | 1 | 0 |
| HC936482 | Photobacterium profundum | 46.5277777777778 | 720.0 | observed | 1 | 0 |
| HC936484 | Photobacterium profundum | 43.4722222222222 | 720.0 | observed | 1 | 0 |
| HC964618 | Thiocapsa roseopersicina | 65.2777777777778 | 720.0 | observed | 1 | 0 |
| HC965255 | Magnetococcus marinus mc-1 | 49.5833333333333 | 720.0 | observed | 1 | 0 |
| HC984397 | Magnetococcus marinus mc-1 | 49.5833333333333 | 720.0 | observed | 1 | 0 |
| HC995075 | Archaeoglobus fulgidus dsm 4304 | 50.9722222222222 | 720.0 | observed | 1 | 0 |
| HD001258 | Magnetococcus marinus mc-1 | 49.5833333333333 | 720.0 | observed | 1 | 0 |
| HD018810 | Vibrio cholerae o1 biovar el tor str. n16961 | 51.1111111111111 | 720.0 | observed | 1 | 0 |
| HD018918 | Vibrio parahaemolyticus rimd 2210633 | 46.8055555555556 | 720.0 | observed | 1 | 0 |
| HD019074 | Aliivibrio fischeri es114 | 43.1944444444444 | 720.0 | observed | 1 | 0 |
| HV950385 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| HW161150 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| HW606834 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| HW805960 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| JA389480 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| JC209366 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| JC209368 | Aequorea victoria | 61.6666666666667 | 720.0 | observed | 1 | 0 |
| JC473208 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| JC582119 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| LF806289 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| LF806374 | Aequorea coerulescens | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| LQ431633 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| LQ888478 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| LY269347 | Aequorea | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| LY542442 | Aequorea coerulescens | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| LY716589 | Aequorea victoria | 62.3611111111111 | 720.0 | observed | 1 | 0 |
| LY838452 | Aequorea victoria | 62.3611111111111 | 720.0 | observed | 1 | 0 |
| LY978735 | Aequorea coerulescens | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| MB021429 | Aequorea | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| MD397900 | Aequorea victoria | 62.2222222222222 | 720.0 | observed | 1 | 0 |
| MP441669 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| OF097878 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
| OF097884 | Aequorea victoria | 61.3888888888889 | 720.0 | observed | 1 | 0 |
| OG143506 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
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CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);