Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
94 rows where Is_annotated = 0 and Sequence_length = "720.0"
This data as json, CSV (advanced)
These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name
Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
---|---|---|---|---|---|---|
AX207710 | Aequorea victoria | 61.3888888888889 | 720.0 | observed | 1 | 0 |
AX233586 | Aequorea victoria | 61.3888888888889 | 720.0 | observed | 1 | 0 |
AX361574 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
AX666128 | Renilla reniformis | 62.2222222222222 | 720.0 | observed | 1 | 0 |
AX813325 | Aequorea coerulescens | 37.9166666666667 | 720.0 | observed | 0 | 0 |
AX815521 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
AX815525 | Aequorea victoria | 61.9444444444444 | 720.0 | observed | 1 | 0 |
AX815527 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
AX815534 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
AX815535 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
AX815536 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
BD136947 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
BD136953 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
BD374385 | Aequorea victoria | 61.3888888888889 | 720.0 | observed | 1 | 0 |
CQ788406 | Nodularia spumigena | 34.4444444444444 | 720.0 | observed | 0 | 0 |
CQ793257 | Nodularia spumigena | 34.4444444444444 | 720.0 | observed | 0 | 0 |
CQ793626 | Nodularia spumigena | 34.4444444444444 | 720.0 | observed | 0 | 0 |
CQ897010 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
CS050510 | Nodularia spumigena nsor10 | 34.4444444444444 | 720.0 | observed | 0 | 0 |
CS499892 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
DD087894 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
DD089763 | Aequorea victoria | 43.1944444444444 | 720.0 | observed | 1 | 0 |
DD116165 | Renilla reniformis | 61.5277777777778 | 720.0 | observed | 1 | 0 |
DD122476 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
DD122477 | Aequorea victoria | 62.0833333333333 | 720.0 | observed | 1 | 0 |
DD122478 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
DD122479 | Aequorea victoria | 61.3888888888889 | 720.0 | observed | 1 | 0 |
DD173687 | Aequorea victoria | 43.1944444444444 | 720.0 | observed | 1 | 0 |
DD258738 | Renilla reniformis | 40.4166666666667 | 720.0 | observed | 1 | 0 |
DD400879 | Aequorea victoria | 43.1944444444444 | 720.0 | observed | 1 | 0 |
DD420090 | Aequorea victoria | 61.9444444444444 | 720.0 | observed | 1 | 0 |
DD420091 | Aequorea victoria | 62.2222222222222 | 720.0 | observed | 1 | 0 |
DD431503 | Aequorea victoria | 61.9444444444444 | 720.0 | observed | 1 | 0 |
DD431504 | Aequorea victoria | 62.2222222222222 | 720.0 | observed | 1 | 0 |
DJ381358 | Renilla reniformis | 40.4166666666667 | 720.0 | observed | 1 | 0 |
DL484427 | Fundulus heteroclitus | 47.5 | 720.0 | observed | 0 | 0 |
DM011586 | Anguilla japonica | 43.0555555555556 | 720.0 | observed | 0 | 0 |
DM011645 | Anguilla japonica | 63.1944444444444 | 720.0 | observed | 0 | 0 |
DM012080 | Anguilla japonica | 39.0277777777778 | 720.0 | observed | 0 | 0 |
DM012236 | Anguilla japonica | 49.8611111111111 | 720.0 | observed | 0 | 0 |
FW300700 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
FW343413 | Aequorea | 61.5277777777778 | 720.0 | observed | 1 | 0 |
FW577224 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
GM003376 | Aequorea victoria | 43.1944444444444 | 720.0 | observed | 1 | 0 |
HB878282 | Shewanella oneidensis | 49.0277777777778 | 720.0 | observed | 1 | 0 |
HB878883 | Rhodopirellula baltica | 56.3888888888889 | 720.0 | observed | 1 | 0 |
HB878971 | Shewanella oneidensis | 49.0277777777778 | 720.0 | observed | 1 | 0 |
HB879073 | Photobacterium profundum | 46.5277777777778 | 720.0 | observed | 1 | 0 |
HB879075 | Photobacterium profundum | 43.4722222222222 | 720.0 | observed | 1 | 0 |
HB926988 | Magnetococcus marinus mc-1 | 49.5833333333333 | 720.0 | observed | 1 | 0 |
HB943848 | Magnetococcus marinus mc-1 | 49.5833333333333 | 720.0 | observed | 1 | 0 |
HC729247 | Ostreococcus tauri | 57.9166666666667 | 720.0 | observed | 1 | 0 |
HC931934 | Vibrio parahaemolyticus | 49.0277777777778 | 720.0 | observed | 1 | 0 |
HC933245 | Shewanella oneidensis | 49.0277777777778 | 720.0 | observed | 1 | 0 |
HC935603 | Rhodopirellula baltica | 56.3888888888889 | 720.0 | observed | 1 | 0 |
HC935691 | Shewanella oneidensis | 49.0277777777778 | 720.0 | observed | 1 | 0 |
HC935793 | Photobacterium profundum | 46.5277777777778 | 720.0 | observed | 1 | 0 |
HC935795 | Photobacterium profundum | 43.4722222222222 | 720.0 | observed | 1 | 0 |
HC936292 | Rhodopirellula baltica | 56.3888888888889 | 720.0 | observed | 1 | 0 |
HC936380 | Shewanella oneidensis | 49.0277777777778 | 720.0 | observed | 1 | 0 |
HC936482 | Photobacterium profundum | 46.5277777777778 | 720.0 | observed | 1 | 0 |
HC936484 | Photobacterium profundum | 43.4722222222222 | 720.0 | observed | 1 | 0 |
HC964618 | Thiocapsa roseopersicina | 65.2777777777778 | 720.0 | observed | 1 | 0 |
HC965255 | Magnetococcus marinus mc-1 | 49.5833333333333 | 720.0 | observed | 1 | 0 |
HC984397 | Magnetococcus marinus mc-1 | 49.5833333333333 | 720.0 | observed | 1 | 0 |
HC995075 | Archaeoglobus fulgidus dsm 4304 | 50.9722222222222 | 720.0 | observed | 1 | 0 |
HD001258 | Magnetococcus marinus mc-1 | 49.5833333333333 | 720.0 | observed | 1 | 0 |
HD018810 | Vibrio cholerae o1 biovar el tor str. n16961 | 51.1111111111111 | 720.0 | observed | 1 | 0 |
HD018918 | Vibrio parahaemolyticus rimd 2210633 | 46.8055555555556 | 720.0 | observed | 1 | 0 |
HD019074 | Aliivibrio fischeri es114 | 43.1944444444444 | 720.0 | observed | 1 | 0 |
HV950385 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
HW161150 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
HW606834 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
HW805960 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
JA389480 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
JC209366 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
JC209368 | Aequorea victoria | 61.6666666666667 | 720.0 | observed | 1 | 0 |
JC473208 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
JC582119 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
LF806289 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
LF806374 | Aequorea coerulescens | 61.5277777777778 | 720.0 | observed | 1 | 0 |
LQ431633 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
LQ888478 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
LY269347 | Aequorea | 61.5277777777778 | 720.0 | observed | 1 | 0 |
LY542442 | Aequorea coerulescens | 61.5277777777778 | 720.0 | observed | 1 | 0 |
LY716589 | Aequorea victoria | 62.3611111111111 | 720.0 | observed | 1 | 0 |
LY838452 | Aequorea victoria | 62.3611111111111 | 720.0 | observed | 1 | 0 |
LY978735 | Aequorea coerulescens | 61.5277777777778 | 720.0 | observed | 1 | 0 |
MB021429 | Aequorea | 61.5277777777778 | 720.0 | observed | 1 | 0 |
MD397900 | Aequorea victoria | 62.2222222222222 | 720.0 | observed | 1 | 0 |
MP441669 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
OF097878 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
OF097884 | Aequorea victoria | 61.3888888888889 | 720.0 | observed | 1 | 0 |
OG143506 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 0 |
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CREATE TABLE Marine_Sequences ( Sequence_accession_number TEXT PRIMARY KEY, Species_name TEXT, GC_content TEXT, Sequence_length TEXT, Sequence_status TEXT, Is_protein_coding_sequence INTEGER, Is_annotated INTEGER, FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name), FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number) );