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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

48 rows where Is_annotated = 0, Sequence_length = "720.0" and Species_name = "Aequorea victoria"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Species_name

Is_annotated 1

  • - · 48 ✖
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
AX207710 Aequorea victoria 61.3888888888889 720.0 observed 1 0
AX233586 Aequorea victoria 61.3888888888889 720.0 observed 1 0
AX361574 Aequorea victoria 61.5277777777778 720.0 observed 1 0
AX815521 Aequorea victoria 61.5277777777778 720.0 observed 1 0
AX815525 Aequorea victoria 61.9444444444444 720.0 observed 1 0
AX815527 Aequorea victoria 61.5277777777778 720.0 observed 1 0
AX815534 Aequorea victoria 61.5277777777778 720.0 observed 1 0
AX815535 Aequorea victoria 61.5277777777778 720.0 observed 1 0
AX815536 Aequorea victoria 61.5277777777778 720.0 observed 1 0
BD136947 Aequorea victoria 61.5277777777778 720.0 observed 1 0
BD136953 Aequorea victoria 61.5277777777778 720.0 observed 1 0
BD374385 Aequorea victoria 61.3888888888889 720.0 observed 1 0
CQ897010 Aequorea victoria 61.5277777777778 720.0 observed 1 0
CS499892 Aequorea victoria 61.5277777777778 720.0 observed 1 0
DD087894 Aequorea victoria 61.5277777777778 720.0 observed 1 0
DD089763 Aequorea victoria 43.1944444444444 720.0 observed 1 0
DD122476 Aequorea victoria 61.5277777777778 720.0 observed 1 0
DD122477 Aequorea victoria 62.0833333333333 720.0 observed 1 0
DD122478 Aequorea victoria 61.5277777777778 720.0 observed 1 0
DD122479 Aequorea victoria 61.3888888888889 720.0 observed 1 0
DD173687 Aequorea victoria 43.1944444444444 720.0 observed 1 0
DD400879 Aequorea victoria 43.1944444444444 720.0 observed 1 0
DD420090 Aequorea victoria 61.9444444444444 720.0 observed 1 0
DD420091 Aequorea victoria 62.2222222222222 720.0 observed 1 0
DD431503 Aequorea victoria 61.9444444444444 720.0 observed 1 0
DD431504 Aequorea victoria 62.2222222222222 720.0 observed 1 0
FW300700 Aequorea victoria 61.5277777777778 720.0 observed 1 0
FW577224 Aequorea victoria 61.5277777777778 720.0 observed 1 0
GM003376 Aequorea victoria 43.1944444444444 720.0 observed 1 0
HV950385 Aequorea victoria 61.5277777777778 720.0 observed 1 0
HW161150 Aequorea victoria 61.5277777777778 720.0 observed 1 0
HW606834 Aequorea victoria 61.5277777777778 720.0 observed 1 0
HW805960 Aequorea victoria 61.5277777777778 720.0 observed 1 0
JA389480 Aequorea victoria 61.5277777777778 720.0 observed 1 0
JC209366 Aequorea victoria 61.5277777777778 720.0 observed 1 0
JC209368 Aequorea victoria 61.6666666666667 720.0 observed 1 0
JC473208 Aequorea victoria 61.5277777777778 720.0 observed 1 0
JC582119 Aequorea victoria 61.5277777777778 720.0 observed 1 0
LF806289 Aequorea victoria 61.5277777777778 720.0 observed 1 0
LQ431633 Aequorea victoria 61.5277777777778 720.0 observed 1 0
LQ888478 Aequorea victoria 61.5277777777778 720.0 observed 1 0
LY716589 Aequorea victoria 62.3611111111111 720.0 observed 1 0
LY838452 Aequorea victoria 62.3611111111111 720.0 observed 1 0
MD397900 Aequorea victoria 62.2222222222222 720.0 observed 1 0
MP441669 Aequorea victoria 61.5277777777778 720.0 observed 1 0
OF097878 Aequorea victoria 61.5277777777778 720.0 observed 1 0
OF097884 Aequorea victoria 61.3888888888889 720.0 observed 1 0
OG143506 Aequorea victoria 61.5277777777778 720.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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