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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

64 rows where Is_annotated = 0, Sequence_status = "observed" and Species_name = "Ginglymostoma cirratum"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
AX705151 Ginglymostoma cirratum 50.1474926253687 339.0 observed 1 0
AX705152 Ginglymostoma cirratum 50.1474926253687 339.0 observed 0 0
AX705154 Ginglymostoma cirratum 49.8525073746313 339.0 observed 1 0
AX705155 Ginglymostoma cirratum 49.8525073746313 339.0 observed 0 0
AX705157 Ginglymostoma cirratum 48.3870967741936 341.0 observed 0 0
AX705158 Ginglymostoma cirratum 48.5380116959064 342.0 observed 0 0
AX705160 Ginglymostoma cirratum 48.5380116959064 342.0 observed 1 0
AX705161 Ginglymostoma cirratum 48.5380116959064 342.0 observed 0 0
AX705162 Ginglymostoma cirratum 54.3478260869565 46.0 observed 0 0
AX705163 Ginglymostoma cirratum 54.3478260869565 46.0 observed 0 0
AX705164 Ginglymostoma cirratum 46.1538461538462 39.0 observed 0 0
DD180859 Ginglymostoma cirratum 50.1474926253687 339.0 observed 1 0
DD180860 Ginglymostoma cirratum 50.1474926253687 339.0 observed 0 0
DD180861 Ginglymostoma cirratum 49.8525073746313 339.0 observed 1 0
DD180862 Ginglymostoma cirratum 49.8525073746313 339.0 observed 0 0
DD180863 Ginglymostoma cirratum 48.3870967741936 341.0 observed 0 0
DD180864 Ginglymostoma cirratum 48.5380116959064 342.0 observed 0 0
DD180865 Ginglymostoma cirratum 48.5380116959064 342.0 observed 1 0
DD180866 Ginglymostoma cirratum 48.5380116959064 342.0 observed 0 0
DD180867 Ginglymostoma cirratum 54.3478260869565 46.0 observed 0 0
DD180868 Ginglymostoma cirratum 54.3478260869565 46.0 observed 0 0
DD180869 Ginglymostoma cirratum 46.1538461538462 39.0 observed 0 0
HD060803 Ginglymostoma cirratum 50.1474926253687 339.0 observed 1 0
HD060804 Ginglymostoma cirratum 50.1474926253687 339.0 observed 0 0
HD060806 Ginglymostoma cirratum 49.8525073746313 339.0 observed 1 0
HD060807 Ginglymostoma cirratum 49.8525073746313 339.0 observed 0 0
HD060809 Ginglymostoma cirratum 48.3870967741936 341.0 observed 0 0
HD060810 Ginglymostoma cirratum 48.5380116959064 342.0 observed 0 0
HD060812 Ginglymostoma cirratum 48.5380116959064 342.0 observed 1 0
HD060813 Ginglymostoma cirratum 48.5380116959064 342.0 observed 0 0
HD060814 Ginglymostoma cirratum 54.3478260869565 46.0 observed 0 0
HD060815 Ginglymostoma cirratum 54.3478260869565 46.0 observed 0 0
HD060816 Ginglymostoma cirratum 46.1538461538462 39.0 observed 0 0
HI999867 Ginglymostoma cirratum 50.1474926253687 339.0 observed 1 0
HI999868 Ginglymostoma cirratum 50.1474926253687 339.0 observed 0 0
HI999870 Ginglymostoma cirratum 49.8525073746313 339.0 observed 1 0
HI999871 Ginglymostoma cirratum 49.8525073746313 339.0 observed 0 0
HI999873 Ginglymostoma cirratum 48.3870967741936 341.0 observed 0 0
HI999874 Ginglymostoma cirratum 48.5380116959064 342.0 observed 0 0
HI999876 Ginglymostoma cirratum 48.5380116959064 342.0 observed 1 0
HI999877 Ginglymostoma cirratum 48.5380116959064 342.0 observed 0 0
HI999878 Ginglymostoma cirratum 54.3478260869565 46.0 observed 0 0
HI999879 Ginglymostoma cirratum 54.3478260869565 46.0 observed 0 0
HI999880 Ginglymostoma cirratum 46.1538461538462 39.0 observed 0 0
JA013251 Ginglymostoma cirratum 50.1474926253687 339.0 observed 0 0
JA013254 Ginglymostoma cirratum 49.8525073746313 339.0 observed 0 0
JA013256 Ginglymostoma cirratum 48.3870967741936 341.0 observed 0 0
JA013257 Ginglymostoma cirratum 48.5380116959064 342.0 observed 0 0
JA013259 Ginglymostoma cirratum 48.5380116959064 342.0 observed 1 0
JA013260 Ginglymostoma cirratum 48.5380116959064 342.0 observed 0 0
JA013261 Ginglymostoma cirratum 54.3478260869565 46.0 observed 0 0
JA013262 Ginglymostoma cirratum 54.3478260869565 46.0 observed 0 0
JA013263 Ginglymostoma cirratum 46.1538461538462 39.0 observed 0 0
JA013333 Ginglymostoma cirratum 50.1474926253687 339.0 observed 1 0
JA013334 Ginglymostoma cirratum 50.1474926253687 339.0 observed 0 0
JA013336 Ginglymostoma cirratum 49.8525073746313 339.0 observed 1 0
JA013337 Ginglymostoma cirratum 49.8525073746313 339.0 observed 0 0
JA013339 Ginglymostoma cirratum 48.3870967741936 341.0 observed 0 0
JA013340 Ginglymostoma cirratum 48.5380116959064 342.0 observed 0 0
JA013342 Ginglymostoma cirratum 48.5380116959064 342.0 observed 1 0
JA013343 Ginglymostoma cirratum 48.5380116959064 342.0 observed 0 0
JA013344 Ginglymostoma cirratum 54.3478260869565 46.0 observed 0 0
JA013345 Ginglymostoma cirratum 54.3478260869565 46.0 observed 0 0
JA013346 Ginglymostoma cirratum 46.1538461538462 39.0 observed 0 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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