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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

28 rows where Is_annotated = 0 and Species_name = "Conus omaria"

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These facets timed out: Sequence_status, Is_annotated, Species_name

Is_protein_coding_sequence 2

  • 0 23
  • 1 5
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
BD261463 Conus omaria 55.3956834532374 139.0 observed 0 0
BD261507 Conus omaria 55.4140127388535 157.0 observed 0 0
BD261508 Conus omaria 54.6875 128.0 observed 0 0
BD261509 Conus omaria 56.4935064935065 154.0 observed 0 0
BD261510 Conus omaria 53.5211267605634 142.0 observed 0 0
BD261511 Conus omaria 55.4140127388535 157.0 observed 0 0
DD101410 Conus omaria 46.0750853242321 293.0 observed 0 0
DD101411 Conus omaria 46.7576791808874 293.0 observed 0 0
DD101412 Conus omaria 47.9310344827586 290.0 observed 0 0
DD101413 Conus omaria 48.4641638225256 293.0 observed 0 0
DJ379386 Conus omaria 51.1070110701107 542.0 observed 0 0
DJ379388 Conus omaria 46.4150943396226 265.0 observed 1 0
DJ379401 Conus omaria 45.3846153846154 260.0 observed 1 0
DJ379402 Conus omaria 48.2758620689655 261.0 observed 1 0
DJ379403 Conus omaria 47.4903474903475 259.0 observed 1 0
DJ379412 Conus omaria 53.0063291139241 632.0 observed 0 0
DJ379413 Conus omaria 53.6923076923077 650.0 observed 0 0
DJ379416 Conus omaria 52.2935779816514 545.0 observed 0 0
DJ379417 Conus omaria 50.374531835206 534.0 observed 0 0
DJ379426 Conus omaria 50.5415162454874 277.0 observed 1 0
DJ379454 Conus omaria 46.1818181818182 275.0 observed 0 0
DJ379462 Conus omaria 50.0 552.0 observed 0 0
FB300103 Conus omaria 55.3956834532374 139.0 observed 0 0
FB300191 Conus omaria 55.4140127388535 157.0 observed 0 0
FB300193 Conus omaria 54.6875 128.0 observed 0 0
FB300195 Conus omaria 56.4935064935065 154.0 observed 0 0
FB300197 Conus omaria 53.5211267605634 142.0 observed 0 0
FB300199 Conus omaria 55.4140127388535 157.0 observed 0 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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