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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

255 rows where Is_annotated = 0 and Species_name = "Idiomarina loihiensis l2tr"

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Species_name 1

  • Idiomarina loihiensis l2tr · 255 ✖

Sequence_status 1

  • observed 255

Is_protein_coding_sequence 1

  • 1 255

Is_annotated 1

  • - · 255 ✖
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
CS475894 Idiomarina loihiensis l2tr 48.8050314465409 795.0 observed 1 0
CS498117 Idiomarina loihiensis l2tr 48.8050314465409 795.0 observed 1 0
HB902748 Idiomarina loihiensis l2tr 48.2804232804233 1512.0 observed 1 0
HB907626 Idiomarina loihiensis l2tr 43.9024390243902 615.0 observed 1 0
HB910616 Idiomarina loihiensis l2tr 38.8451443569554 1143.0 observed 1 0
HB914281 Idiomarina loihiensis l2tr 48.2804232804233 1512.0 observed 1 0
HB915575 Idiomarina loihiensis l2tr 46.1333333333333 375.0 observed 1 0
HB915990 Idiomarina loihiensis l2tr 48.1132075471698 1272.0 observed 1 0
HB915992 Idiomarina loihiensis l2tr 43.6893203883495 1236.0 observed 1 0
HB916101 Idiomarina loihiensis l2tr 43.4456928838951 267.0 observed 1 0
HB916219 Idiomarina loihiensis l2tr 53.6908881199539 3468.0 observed 1 0
HB916997 Idiomarina loihiensis l2tr 51.8518518518519 864.0 observed 1 0
HB918438 Idiomarina loihiensis l2tr 46.1479786422578 1311.0 observed 1 0
HB918440 Idiomarina loihiensis l2tr 50.8599508599509 1221.0 observed 1 0
HB919396 Idiomarina loihiensis l2tr 45.6140350877193 1425.0 observed 1 0
HB919398 Idiomarina loihiensis l2tr 47.8017585931255 1251.0 observed 1 0
HB919400 Idiomarina loihiensis l2tr 48.7955182072829 1785.0 observed 1 0
HB921801 Idiomarina loihiensis l2tr 50.1165501165501 429.0 observed 1 0
HB922834 Idiomarina loihiensis l2tr 43.4456928838951 267.0 observed 1 0
HB923905 Idiomarina loihiensis l2tr 51.8518518518519 864.0 observed 1 0
HB923964 Idiomarina loihiensis l2tr 48.2804232804233 1512.0 observed 1 0
HB924288 Idiomarina loihiensis l2tr 46.1333333333333 375.0 observed 1 0
HB924672 Idiomarina loihiensis l2tr 48.6772486772487 2268.0 observed 1 0
HB925607 Idiomarina loihiensis l2tr 46.1479786422578 1311.0 observed 1 0
HB925609 Idiomarina loihiensis l2tr 50.8599508599509 1221.0 observed 1 0
HB925903 Idiomarina loihiensis l2tr 43.4456928838951 267.0 observed 1 0
HB926135 Idiomarina loihiensis l2tr 43.6472346786248 669.0 observed 1 0
HB926640 Idiomarina loihiensis l2tr 45.6140350877193 1425.0 observed 1 0
HB926642 Idiomarina loihiensis l2tr 47.8017585931255 1251.0 observed 1 0
HB926644 Idiomarina loihiensis l2tr 48.7955182072829 1785.0 observed 1 0
HB930618 Idiomarina loihiensis l2tr 50.1449275362319 1035.0 observed 1 0
HB931266 Idiomarina loihiensis l2tr 50.1016260162602 984.0 observed 1 0
HB931403 Idiomarina loihiensis l2tr 48.9817792068596 933.0 observed 1 0
HB933103 Idiomarina loihiensis l2tr 51.8518518518519 864.0 observed 1 0
HB933574 Idiomarina loihiensis l2tr 38.8451443569554 1143.0 observed 1 0
HB935030 Idiomarina loihiensis l2tr 50.817341862118 1407.0 observed 1 0
HB935032 Idiomarina loihiensis l2tr 49.5898583146905 1341.0 observed 1 0
HB936046 Idiomarina loihiensis l2tr 46.1333333333333 375.0 observed 1 0
HB936290 Idiomarina loihiensis l2tr 49.9727223131478 1833.0 observed 1 0
HB938141 Idiomarina loihiensis l2tr 43.6472346786248 669.0 observed 1 0
HB938424 Idiomarina loihiensis l2tr 50.1016260162602 984.0 observed 1 0
HB938679 Idiomarina loihiensis l2tr 46.1333333333333 375.0 observed 1 0
HB939184 Idiomarina loihiensis l2tr 43.9024390243902 615.0 observed 1 0
HB940203 Idiomarina loihiensis l2tr 53.6908881199539 3468.0 observed 1 0
HB940250 Idiomarina loihiensis l2tr 48.2804232804233 1512.0 observed 1 0
HB941785 Idiomarina loihiensis l2tr 48.4672474991933 3099.0 observed 1 0
HB942395 Idiomarina loihiensis l2tr 46.1479786422578 1311.0 observed 1 0
HB942397 Idiomarina loihiensis l2tr 50.8599508599509 1221.0 observed 1 0
HB942665 Idiomarina loihiensis l2tr 48.1132075471698 1272.0 observed 1 0
HB942667 Idiomarina loihiensis l2tr 43.6893203883495 1236.0 observed 1 0
HB942874 Idiomarina loihiensis l2tr 43.6472346786248 669.0 observed 1 0
HB943500 Idiomarina loihiensis l2tr 45.6140350877193 1425.0 observed 1 0
HB943502 Idiomarina loihiensis l2tr 47.8017585931255 1251.0 observed 1 0
HB943504 Idiomarina loihiensis l2tr 48.7955182072829 1785.0 observed 1 0
HB944186 Idiomarina loihiensis l2tr 51.4382402707276 591.0 observed 1 0
HB945708 Idiomarina loihiensis l2tr 45.5284552845528 738.0 observed 1 0
HB946580 Idiomarina loihiensis l2tr 44.2477876106195 339.0 observed 1 0
HB946582 Idiomarina loihiensis l2tr 51.9174041297935 339.0 observed 1 0
HB946975 Idiomarina loihiensis l2tr 47.8017585931255 1251.0 observed 1 0
HB947697 Idiomarina loihiensis l2tr 50.1449275362319 1035.0 observed 1 0
HB948091 Idiomarina loihiensis l2tr 50.1016260162602 984.0 observed 1 0
HB948354 Idiomarina loihiensis l2tr 46.5333333333333 1500.0 observed 1 0
HB950033 Idiomarina loihiensis l2tr 46.3768115942029 759.0 observed 1 0
HB950920 Idiomarina loihiensis l2tr 50.1165501165501 429.0 observed 1 0
HB951258 Idiomarina loihiensis l2tr 48.2804232804233 1512.0 observed 1 0
HB953018 Idiomarina loihiensis l2tr 45.1741293532338 1005.0 observed 1 0
HB954245 Idiomarina loihiensis l2tr 43.6472346786248 669.0 observed 1 0
HB954750 Idiomarina loihiensis l2tr 45.6140350877193 1425.0 observed 1 0
HB954752 Idiomarina loihiensis l2tr 47.8017585931255 1251.0 observed 1 0
HB954754 Idiomarina loihiensis l2tr 48.7955182072829 1785.0 observed 1 0
HB956153 Idiomarina loihiensis l2tr 50.1016260162602 984.0 observed 1 0
HB956416 Idiomarina loihiensis l2tr 46.5333333333333 1500.0 observed 1 0
HB957258 Idiomarina loihiensis l2tr 48.2804232804233 1512.0 observed 1 0
HB959390 Idiomarina loihiensis l2tr 45.5284552845528 738.0 observed 1 0
HB959874 Idiomarina loihiensis l2tr 51.8518518518519 864.0 observed 1 0
HB960016 Idiomarina loihiensis l2tr 46.1333333333333 375.0 observed 1 0
HB960159 Idiomarina loihiensis l2tr 51.5658515658516 2331.0 observed 1 0
HB960562 Idiomarina loihiensis l2tr 48.6772486772487 2268.0 observed 1 0
HB962043 Idiomarina loihiensis l2tr 43.015873015873 1260.0 observed 1 0
HB963836 Idiomarina loihiensis l2tr 46.3768115942029 759.0 observed 1 0
HB964315 Idiomarina loihiensis l2tr 50.5112474437628 1956.0 observed 1 0
HB964484 Idiomarina loihiensis l2tr 49.9343832020997 1524.0 observed 1 0
HB964676 Idiomarina loihiensis l2tr 48.1707317073171 984.0 observed 1 0
HB965002 Idiomarina loihiensis l2tr 43.7275985663082 279.0 observed 1 0
HB965723 Idiomarina loihiensis l2tr 51.8518518518519 864.0 observed 1 0
HB966843 Idiomarina loihiensis l2tr 43.6472346786248 669.0 observed 1 0
HB967420 Idiomarina loihiensis l2tr 50.1016260162602 984.0 observed 1 0
HB974808 Idiomarina loihiensis l2tr 50.9803921568627 663.0 observed 1 0
HC506459 Idiomarina loihiensis l2tr 51.8518518518519 864.0 observed 1 0
HC904284 Idiomarina loihiensis l2tr 47.8853046594982 1395.0 observed 1 0
HC906284 Idiomarina loihiensis l2tr 48.5523385300668 1347.0 observed 1 0
HC913856 Idiomarina loihiensis l2tr 48.5523385300668 1347.0 observed 1 0
HC955041 Idiomarina loihiensis l2tr 51.4382402707276 591.0 observed 1 0
HC955378 Idiomarina loihiensis l2tr 40.9722222222222 288.0 observed 1 0
HC957154 Idiomarina loihiensis l2tr 48.2804232804233 1512.0 observed 1 0
HC959115 Idiomarina loihiensis l2tr 49.9727223131478 1833.0 observed 1 0
HC960157 Idiomarina loihiensis l2tr 48.2804232804233 1512.0 observed 1 0
HC961456 Idiomarina loihiensis l2tr 46.1479786422578 1311.0 observed 1 0
HC961458 Idiomarina loihiensis l2tr 50.8599508599509 1221.0 observed 1 0
HC962497 Idiomarina loihiensis l2tr 50.1165501165501 429.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
Powered by Datasette · Queries took 315.973ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT