Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
172 rows where Is_annotated = 0 and Species_name = "Methanosarcina acetivorans"
This data as json, CSV (advanced)
Species_name 1
- Methanosarcina acetivorans · 172 ✖
Sequence_status 1
- observed 172
Is_annotated 1
- - · 172 ✖
Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
---|---|---|---|---|---|---|
DD192132 | Methanosarcina acetivorans | 45.3416149068323 | 483.0 | observed | 1 | 0 |
DD249116 | Methanosarcina acetivorans | 45.3416149068323 | 483.0 | observed | 1 | 0 |
DD362752 | Methanosarcina acetivorans | 45.3416149068323 | 483.0 | observed | 1 | 0 |
DD420890 | Methanosarcina acetivorans | 51.4322916666667 | 768.0 | observed | 1 | 0 |
DL136966 | Methanosarcina acetivorans | 60.0 | 75.0 | observed | 0 | 0 |
FB783975 | Methanosarcina acetivorans | 49.5073891625616 | 1218.0 | observed | 1 | 0 |
FB791513 | Methanosarcina acetivorans | 49.0358126721763 | 1452.0 | observed | 1 | 0 |
FB791525 | Methanosarcina acetivorans | 49.5073891625616 | 1218.0 | observed | 1 | 0 |
FB807788 | Methanosarcina acetivorans | 48.377581120944 | 678.0 | observed | 1 | 0 |
FB832551 | Methanosarcina acetivorans | 52.8627450980392 | 1275.0 | observed | 1 | 0 |
FB835437 | Methanosarcina acetivorans | 48.377581120944 | 678.0 | observed | 1 | 0 |
FB842838 | Methanosarcina acetivorans | 48.377581120944 | 678.0 | observed | 1 | 0 |
FB863499 | Methanosarcina acetivorans | 48.377581120944 | 678.0 | observed | 1 | 0 |
FB883076 | Methanosarcina acetivorans | 48.377581120944 | 678.0 | observed | 1 | 0 |
FW553254 | Methanosarcina acetivorans | 53.1666666666667 | 600.0 | observed | 1 | 0 |
GM737033 | Methanosarcina acetivorans | 50.9731232622799 | 3237.0 | observed | 1 | 0 |
GM965643 | Methanosarcina acetivorans | 52.8627450980392 | 1275.0 | observed | 1 | 0 |
GM965653 | Methanosarcina acetivorans | 50.6730007917656 | 1263.0 | observed | 1 | 0 |
GN129847 | Methanosarcina acetivorans | 53.5864978902954 | 1185.0 | observed | 1 | 0 |
HB654022 | Methanosarcina acetivorans | 49.0358126721763 | 1452.0 | observed | 1 | 0 |
HB654034 | Methanosarcina acetivorans | 49.5073891625616 | 1218.0 | observed | 1 | 0 |
HB661572 | Methanosarcina acetivorans | 49.0358126721763 | 1452.0 | observed | 1 | 0 |
HB661584 | Methanosarcina acetivorans | 49.5073891625616 | 1218.0 | observed | 1 | 0 |
HB663730 | Methanosarcina acetivorans | 48.377581120944 | 678.0 | observed | 1 | 0 |
HB677847 | Methanosarcina acetivorans | 48.377581120944 | 678.0 | observed | 1 | 0 |
HB678126 | Methanosarcina acetivorans | 47.2868217054264 | 1548.0 | observed | 1 | 0 |
HB678130 | Methanosarcina acetivorans | 49.8722860791826 | 1566.0 | observed | 1 | 0 |
HB702610 | Methanosarcina acetivorans | 52.8627450980392 | 1275.0 | observed | 1 | 0 |
HB702622 | Methanosarcina acetivorans | 50.6730007917656 | 1263.0 | observed | 1 | 0 |
HB705496 | Methanosarcina acetivorans | 48.377581120944 | 678.0 | observed | 1 | 0 |
HB712897 | Methanosarcina acetivorans | 48.377581120944 | 678.0 | observed | 1 | 0 |
HB733558 | Methanosarcina acetivorans | 48.377581120944 | 678.0 | observed | 1 | 0 |
HB753135 | Methanosarcina acetivorans | 48.377581120944 | 678.0 | observed | 1 | 0 |
HB867442 | Methanosarcina acetivorans | 44.9112978524743 | 1071.0 | observed | 1 | 0 |
HB871375 | Methanosarcina acetivorans | 45.843621399177 | 1215.0 | observed | 1 | 0 |
HB871377 | Methanosarcina acetivorans | 50.5376344086022 | 1209.0 | observed | 1 | 0 |
HB871575 | Methanosarcina acetivorans | 44.9112978524743 | 1071.0 | observed | 1 | 0 |
HB873587 | Methanosarcina acetivorans | 49.2577597840756 | 1482.0 | observed | 1 | 0 |
HB875458 | Methanosarcina acetivorans | 49.2577597840756 | 1482.0 | observed | 1 | 0 |
HB879968 | Methanosarcina acetivorans | 49.2577597840756 | 1482.0 | observed | 1 | 0 |
HB884311 | Methanosarcina acetivorans | 52.7835051546392 | 1455.0 | observed | 1 | 0 |
HB885889 | Methanosarcina acetivorans | 45.843621399177 | 1215.0 | observed | 1 | 0 |
HB885891 | Methanosarcina acetivorans | 50.5376344086022 | 1209.0 | observed | 1 | 0 |
HB888703 | Methanosarcina acetivorans | 49.2577597840756 | 1482.0 | observed | 1 | 0 |
HB889189 | Methanosarcina acetivorans | 44.9112978524743 | 1071.0 | observed | 1 | 0 |
HB889583 | Methanosarcina acetivorans | 45.843621399177 | 1215.0 | observed | 1 | 0 |
HB889585 | Methanosarcina acetivorans | 50.5376344086022 | 1209.0 | observed | 1 | 0 |
HB891260 | Methanosarcina acetivorans | 45.843621399177 | 1215.0 | observed | 1 | 0 |
HB891262 | Methanosarcina acetivorans | 50.5376344086022 | 1209.0 | observed | 1 | 0 |
HB894544 | Methanosarcina acetivorans | 45.843621399177 | 1215.0 | observed | 1 | 0 |
HB894546 | Methanosarcina acetivorans | 50.5376344086022 | 1209.0 | observed | 1 | 0 |
HB899582 | Methanosarcina acetivorans | 47.4130619168787 | 1179.0 | observed | 1 | 0 |
HB899584 | Methanosarcina acetivorans | 47.1524288107203 | 1194.0 | observed | 1 | 0 |
HB899586 | Methanosarcina acetivorans | 44.3349753694581 | 1218.0 | observed | 1 | 0 |
HB902916 | Methanosarcina acetivorans | 48.4375 | 1536.0 | observed | 1 | 0 |
HB903122 | Methanosarcina acetivorans | 42.5 | 600.0 | observed | 1 | 0 |
HB904960 | Methanosarcina acetivorans | 51.0518934081346 | 2139.0 | observed | 1 | 0 |
HB906800 | Methanosarcina acetivorans | 51.9956850053938 | 927.0 | observed | 1 | 0 |
HB909044 | Methanosarcina acetivorans | 51.9956850053938 | 927.0 | observed | 1 | 0 |
HB909549 | Methanosarcina acetivorans | 51.0518934081346 | 2139.0 | observed | 1 | 0 |
HB910082 | Methanosarcina acetivorans | 50.0 | 432.0 | observed | 1 | 0 |
HB912548 | Methanosarcina acetivorans | 46.7764060356653 | 729.0 | observed | 1 | 0 |
HB914449 | Methanosarcina acetivorans | 48.4375 | 1536.0 | observed | 1 | 0 |
HB920246 | Methanosarcina acetivorans | 51.9956850053938 | 927.0 | observed | 1 | 0 |
HB921512 | Methanosarcina acetivorans | 49.2577597840756 | 1482.0 | observed | 1 | 0 |
HB922019 | Methanosarcina acetivorans | 49.1769547325103 | 486.0 | observed | 1 | 0 |
HB924132 | Methanosarcina acetivorans | 48.4375 | 1536.0 | observed | 1 | 0 |
HB927113 | Methanosarcina acetivorans | 46.7764060356653 | 729.0 | observed | 1 | 0 |
HB928979 | Methanosarcina acetivorans | 51.9956850053938 | 927.0 | observed | 1 | 0 |
HB930994 | Methanosarcina acetivorans | 51.0518934081346 | 2139.0 | observed | 1 | 0 |
HB931569 | Methanosarcina acetivorans | 53.9823008849558 | 1017.0 | observed | 1 | 0 |
HB932206 | Methanosarcina acetivorans | 50.0 | 432.0 | observed | 1 | 0 |
HB940418 | Methanosarcina acetivorans | 48.4375 | 1536.0 | observed | 1 | 0 |
HB944446 | Methanosarcina acetivorans | 47.6190476190476 | 609.0 | observed | 1 | 0 |
HB945377 | Methanosarcina acetivorans | 51.9956850053938 | 927.0 | observed | 1 | 0 |
HB948985 | Methanosarcina acetivorans | 50.0 | 432.0 | observed | 1 | 0 |
HB951138 | Methanosarcina acetivorans | 49.1769547325103 | 486.0 | observed | 1 | 0 |
HB951426 | Methanosarcina acetivorans | 48.4375 | 1536.0 | observed | 1 | 0 |
HB953716 | Methanosarcina acetivorans | 50.0 | 432.0 | observed | 1 | 0 |
HB955036 | Methanosarcina acetivorans | 46.7764060356653 | 729.0 | observed | 1 | 0 |
HB957047 | Methanosarcina acetivorans | 50.0 | 432.0 | observed | 1 | 0 |
HB957426 | Methanosarcina acetivorans | 48.4375 | 1536.0 | observed | 1 | 0 |
HB958919 | Methanosarcina acetivorans | 46.7764060356653 | 729.0 | observed | 1 | 0 |
HC897460 | Methanosarcina acetivorans | 50.8843537414966 | 1470.0 | observed | 1 | 0 |
HC899350 | Methanosarcina acetivorans | 49.9702911467617 | 1683.0 | observed | 1 | 0 |
HC900474 | Methanosarcina acetivorans | 43.5835351089588 | 1239.0 | observed | 1 | 0 |
HC901356 | Methanosarcina acetivorans | 50.8843537414966 | 1470.0 | observed | 1 | 0 |
HC906404 | Methanosarcina acetivorans | 46.0905349794239 | 1215.0 | observed | 1 | 0 |
HC912742 | Methanosarcina acetivorans | 44.3181818181818 | 528.0 | observed | 1 | 0 |
HC913976 | Methanosarcina acetivorans | 46.0905349794239 | 1215.0 | observed | 1 | 0 |
HC924851 | Methanosarcina acetivorans | 44.9112978524743 | 1071.0 | observed | 1 | 0 |
HC926271 | Methanosarcina acetivorans | 50.5098039215686 | 1275.0 | observed | 1 | 0 |
HC927908 | Methanosarcina acetivorans | 45.9183673469388 | 1470.0 | observed | 1 | 0 |
HC928230 | Methanosarcina acetivorans | 52.1505376344086 | 744.0 | observed | 1 | 0 |
HC928784 | Methanosarcina acetivorans | 45.843621399177 | 1215.0 | observed | 1 | 0 |
HC928786 | Methanosarcina acetivorans | 50.5376344086022 | 1209.0 | observed | 1 | 0 |
HC928896 | Methanosarcina acetivorans | 42.5 | 600.0 | observed | 1 | 0 |
HC928984 | Methanosarcina acetivorans | 44.9112978524743 | 1071.0 | observed | 1 | 0 |
HC929736 | Methanosarcina acetivorans | 49.2577597840756 | 1482.0 | observed | 1 | 0 |
HC930996 | Methanosarcina acetivorans | 49.2577597840756 | 1482.0 | observed | 1 | 0 |
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CREATE TABLE Marine_Sequences ( Sequence_accession_number TEXT PRIMARY KEY, Species_name TEXT, GC_content TEXT, Sequence_length TEXT, Sequence_status TEXT, Is_protein_coding_sequence INTEGER, Is_annotated INTEGER, FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name), FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number) );