Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
114 rows where Is_annotated = 0 and Species_name = "Rebecca salina"
This data as json, CSV (advanced)
These facets timed out: Is_protein_coding_sequence, Is_annotated, Species_name
Sequence_status 1
- observed 114
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| HH982401 | Rebecca salina | 63.4817813765182 | 1235.0 | observed | 1 | 0 |
| HH982402 | Rebecca salina | 62.8235294117647 | 1700.0 | observed | 0 | 0 |
| HH982403 | Rebecca salina | 60.0660066006601 | 909.0 | observed | 1 | 0 |
| HH982404 | Rebecca salina | 61.1019736842105 | 1216.0 | observed | 0 | 0 |
| HH982405 | Rebecca salina | 56.7213114754098 | 915.0 | observed | 1 | 0 |
| HH982406 | Rebecca salina | 57.9163248564397 | 1219.0 | observed | 0 | 0 |
| HH982407 | Rebecca salina | 65.6 | 125.0 | observed | 0 | 0 |
| HH982408 | Rebecca salina | 66.4434523809524 | 1344.0 | observed | 1 | 0 |
| HH982409 | Rebecca salina | 65.9751037344398 | 1687.0 | observed | 0 | 0 |
| HH982451 | Rebecca salina | 61.8380062305296 | 642.0 | observed | 0 | 0 |
| HH982454 | Rebecca salina | 63.5856079404466 | 1612.0 | observed | 0 | 0 |
| HH982455 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
| HV757246 | Rebecca salina | 63.3177570093458 | 1284.0 | observed | 1 | 0 |
| HV757247 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
| HV757281 | Rebecca salina | 66.4434523809524 | 1344.0 | observed | 1 | 0 |
| HZ406861 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
| HZ406869 | Rebecca salina | 66.4434523809524 | 1344.0 | observed | 1 | 0 |
| HZ406876 | Rebecca salina | 58.3333333333333 | 840.0 | observed | 1 | 0 |
| HZ406877 | Rebecca salina | 63.3177570093458 | 1284.0 | observed | 1 | 0 |
| HZ471278 | Rebecca salina | 63.3177570093458 | 1284.0 | observed | 1 | 0 |
| HZ471279 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
| HZ471313 | Rebecca salina | 66.4434523809524 | 1344.0 | observed | 1 | 0 |
| HZ471331 | Rebecca salina | 58.3333333333333 | 840.0 | observed | 1 | 0 |
| HZ785041 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
| HZ785042 | Rebecca salina | 59.922480620155 | 1290.0 | observed | 1 | 0 |
| JA663704 | Rebecca salina | 63.3177570093458 | 1284.0 | observed | 1 | 0 |
| JA663706 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
| JA663753 | Rebecca salina | 66.4434523809524 | 1344.0 | observed | 1 | 0 |
| JA663776 | Rebecca salina | 58.3333333333333 | 840.0 | observed | 1 | 0 |
| JC257352 | Rebecca salina | 63.4817813765182 | 1235.0 | observed | 1 | 0 |
| JC257353 | Rebecca salina | 62.8235294117647 | 1700.0 | observed | 0 | 0 |
| JC257355 | Rebecca salina | 61.1019736842105 | 1216.0 | observed | 0 | 0 |
| JC257356 | Rebecca salina | 56.7213114754098 | 915.0 | observed | 1 | 0 |
| JC257357 | Rebecca salina | 57.9163248564397 | 1219.0 | observed | 0 | 0 |
| JC257358 | Rebecca salina | 65.6 | 125.0 | observed | 0 | 0 |
| JC257359 | Rebecca salina | 66.4434523809524 | 1344.0 | observed | 1 | 0 |
| JC257360 | Rebecca salina | 65.9751037344398 | 1687.0 | observed | 0 | 0 |
| JC257402 | Rebecca salina | 61.8380062305296 | 642.0 | observed | 0 | 0 |
| JC257405 | Rebecca salina | 63.5856079404466 | 1612.0 | observed | 0 | 0 |
| JC257406 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
| JC318886 | Rebecca salina | 63.4817813765182 | 1235.0 | observed | 1 | 0 |
| JC318887 | Rebecca salina | 62.8235294117647 | 1700.0 | observed | 0 | 0 |
| JC318888 | Rebecca salina | 60.0660066006601 | 909.0 | observed | 1 | 0 |
| JC318889 | Rebecca salina | 61.1019736842105 | 1216.0 | observed | 0 | 0 |
| JC318890 | Rebecca salina | 56.7213114754098 | 915.0 | observed | 1 | 0 |
| JC318891 | Rebecca salina | 57.9163248564397 | 1219.0 | observed | 0 | 0 |
| JC318892 | Rebecca salina | 65.6 | 125.0 | observed | 0 | 0 |
| JC318893 | Rebecca salina | 66.4434523809524 | 1344.0 | observed | 1 | 0 |
| JC318894 | Rebecca salina | 65.9751037344398 | 1687.0 | observed | 0 | 0 |
| JC318936 | Rebecca salina | 61.8380062305296 | 642.0 | observed | 0 | 0 |
| JC318939 | Rebecca salina | 63.5856079404466 | 1612.0 | observed | 0 | 0 |
| JC318940 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
| JC442094 | Rebecca salina | 63.4817813765182 | 1235.0 | observed | 1 | 0 |
| JC442095 | Rebecca salina | 62.8235294117647 | 1700.0 | observed | 0 | 0 |
| JC442096 | Rebecca salina | 60.0660066006601 | 909.0 | observed | 1 | 0 |
| JC442097 | Rebecca salina | 61.1019736842105 | 1216.0 | observed | 0 | 0 |
| JC442098 | Rebecca salina | 56.7213114754098 | 915.0 | observed | 1 | 0 |
| JC442099 | Rebecca salina | 57.9163248564397 | 1219.0 | observed | 0 | 0 |
| JC442100 | Rebecca salina | 65.6 | 125.0 | observed | 0 | 0 |
| JC442101 | Rebecca salina | 66.4434523809524 | 1344.0 | observed | 1 | 0 |
| JC442102 | Rebecca salina | 65.9751037344398 | 1687.0 | observed | 0 | 0 |
| JC442144 | Rebecca salina | 61.8380062305296 | 642.0 | observed | 0 | 0 |
| JC442147 | Rebecca salina | 63.5856079404466 | 1612.0 | observed | 0 | 0 |
| JC442148 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
| LG045240 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
| LG045248 | Rebecca salina | 66.4434523809524 | 1344.0 | observed | 1 | 0 |
| LG045255 | Rebecca salina | 58.3333333333333 | 840.0 | observed | 1 | 0 |
| LG045256 | Rebecca salina | 63.3177570093458 | 1284.0 | observed | 1 | 0 |
| LP053815 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
| LP053826 | Rebecca salina | 66.4434523809524 | 1344.0 | observed | 1 | 0 |
| LP053837 | Rebecca salina | 58.3333333333333 | 840.0 | observed | 1 | 0 |
| LP053839 | Rebecca salina | 63.3177570093458 | 1284.0 | observed | 1 | 0 |
| LQ654804 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
| LQ654812 | Rebecca salina | 66.4434523809524 | 1344.0 | observed | 1 | 0 |
| LQ654820 | Rebecca salina | 58.3333333333333 | 840.0 | observed | 1 | 0 |
| LQ654822 | Rebecca salina | 63.3177570093458 | 1284.0 | observed | 1 | 0 |
| LV578316 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
| LV578321 | Rebecca salina | 66.4434523809524 | 1344.0 | observed | 1 | 0 |
| LV578325 | Rebecca salina | 58.3333333333333 | 840.0 | observed | 1 | 0 |
| LV578326 | Rebecca salina | 63.3177570093458 | 1284.0 | observed | 1 | 0 |
| LY344956 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
| LY344961 | Rebecca salina | 66.4434523809524 | 1344.0 | observed | 1 | 0 |
| LY344965 | Rebecca salina | 58.3333333333333 | 840.0 | observed | 1 | 0 |
| LY344966 | Rebecca salina | 63.3177570093458 | 1284.0 | observed | 1 | 0 |
| LY503274 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
| LY503279 | Rebecca salina | 66.4434523809524 | 1344.0 | observed | 1 | 0 |
| LY503283 | Rebecca salina | 58.3333333333333 | 840.0 | observed | 1 | 0 |
| LY503284 | Rebecca salina | 63.3177570093458 | 1284.0 | observed | 1 | 0 |
| LZ951263 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
| LZ951264 | Rebecca salina | 59.922480620155 | 1290.0 | observed | 1 | 0 |
| LZ992511 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
| LZ992516 | Rebecca salina | 66.4434523809524 | 1344.0 | observed | 1 | 0 |
| LZ992520 | Rebecca salina | 58.3333333333333 | 840.0 | observed | 1 | 0 |
| LZ992521 | Rebecca salina | 63.3177570093458 | 1284.0 | observed | 1 | 0 |
| MA350455 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
| MA350463 | Rebecca salina | 66.4434523809524 | 1344.0 | observed | 1 | 0 |
| MA350470 | Rebecca salina | 58.3333333333333 | 840.0 | observed | 1 | 0 |
| MA350471 | Rebecca salina | 63.3177570093458 | 1284.0 | observed | 1 | 0 |
| MA851902 | Rebecca salina | 63.3177570093458 | 1284.0 | observed | 1 | 0 |
| MA851903 | Rebecca salina | 64.3974960876369 | 1278.0 | observed | 1 | 0 |
Advanced export
JSON shape: default, array, newline-delimited, object
CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);