Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
11 rows where Is_annotated = 0 and Species_name = "Rhodoferax ferrireducens t118"
This data as json, CSV (advanced)
These facets timed out: Sequence_status, Is_annotated, Species_name
Is_protein_coding_sequence 1
- 1 11
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| FB332709 | Rhodoferax ferrireducens t118 | 58.8652482269504 | 1269.0 | observed | 1 | 0 |
| HC913735 | Rhodoferax ferrireducens t118 | 54.6134663341646 | 1203.0 | observed | 1 | 0 |
| HD025500 | Rhodoferax ferrireducens t118 | 59.9206349206349 | 1764.0 | observed | 1 | 0 |
| HD025502 | Rhodoferax ferrireducens t118 | 60.4421175101803 | 1719.0 | observed | 1 | 0 |
| HD025504 | Rhodoferax ferrireducens t118 | 60.151250727167 | 1719.0 | observed | 1 | 0 |
| HD025867 | Rhodoferax ferrireducens t118 | 66.8926553672316 | 885.0 | observed | 1 | 0 |
| HD028181 | Rhodoferax ferrireducens t118 | 61.1303344867359 | 867.0 | observed | 1 | 0 |
| HD031333 | Rhodoferax ferrireducens t118 | 58.2443653618031 | 843.0 | observed | 1 | 0 |
| HD031930 | Rhodoferax ferrireducens t118 | 67.5268817204301 | 465.0 | observed | 1 | 0 |
| HH764048 | Rhodoferax ferrireducens t118 | 58.8652482269504 | 1269.0 | observed | 1 | 0 |
| HH765283 | Rhodoferax ferrireducens t118 | 60.3881278538813 | 876.0 | observed | 1 | 0 |
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CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);