Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
15 rows where Is_annotated = 0 and Species_name = "Vibrio sp."
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Suggested facets: GC_content, Sequence_length
Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
---|---|---|---|---|---|---|
DD333260 | Vibrio sp. | 53.6048064085447 | 1498.0 | observed | 0 | 0 |
DD422038 | Vibrio sp. | 28.8668320926385 | 1209.0 | observed | 1 | 0 |
DD422040 | Vibrio sp. | 53.6048064085447 | 1498.0 | observed | 0 | 0 |
DD431670 | Vibrio sp. | 28.8668320926385 | 1209.0 | observed | 1 | 0 |
DD431672 | Vibrio sp. | 53.6048064085447 | 1498.0 | observed | 0 | 0 |
E32588 | Vibrio sp. | 63.5531135531136 | 1092.0 | observed | 1 | 0 |
HC358186 | Vibrio sp. | 47.0914127423823 | 1083.0 | observed | 1 | 0 |
HW907011 | Vibrio sp. | 53.485254691689 | 1492.0 | observed | 0 | 0 |
HW907025 | Vibrio sp. | 53.485254691689 | 1492.0 | observed | 0 | 0 |
HW907098 | Vibrio sp. | 44.8119325551232 | 1542.0 | observed | 1 | 0 |
HW907099 | Vibrio sp. | 45.4421768707483 | 735.0 | observed | 1 | 0 |
HW907100 | Vibrio sp. | 42.2158548233047 | 1047.0 | observed | 1 | 0 |
HW907101 | Vibrio sp. | 44.8136958710977 | 993.0 | observed | 1 | 0 |
HW907102 | Vibrio sp. | 42.1824104234528 | 1842.0 | observed | 1 | 0 |
OF197315 | Vibrio sp. | 41.6230366492147 | 1146.0 | observed | 1 | 0 |
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CREATE TABLE Marine_Sequences ( Sequence_accession_number TEXT PRIMARY KEY, Species_name TEXT, GC_content TEXT, Sequence_length TEXT, Sequence_status TEXT, Is_protein_coding_sequence INTEGER, Is_annotated INTEGER, FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name), FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number) );