Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
11 rows where Is_annotated = 1, Is_protein_coding_sequence = 1 and Species_name = "Chlorobium phaeovibrioides"
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Species_name 1
- Chlorobium phaeovibrioides · 11 ✖
Sequence_status 1
- predicted 11
Is_protein_coding_sequence 1
- 1 · 11 ✖
Is_annotated 1
- 1 · 11 ✖
Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
---|---|---|---|---|---|---|
HI932517 | Chlorobium phaeovibrioides | 57.5866188769415 | 1674.0 | predicted | 1 | 1 |
HI932695 | Chlorobium phaeovibrioides | 52.8776978417266 | 834.0 | predicted | 1 | 1 |
HI933755 | Chlorobium phaeovibrioides | 56.4599483204134 | 774.0 | predicted | 1 | 1 |
HJ399417 | Chlorobium phaeovibrioides | 51.7241379310345 | 435.0 | predicted | 1 | 1 |
HK438828 | Chlorobium phaeovibrioides | 55.7177615571776 | 1644.0 | predicted | 1 | 1 |
HK454237 | Chlorobium phaeovibrioides | 55.5 | 600.0 | predicted | 1 | 1 |
HK454238 | Chlorobium phaeovibrioides | 56.4950980392157 | 1632.0 | predicted | 1 | 1 |
HL835608 | Chlorobium phaeovibrioides | 46.606334841629 | 663.0 | predicted | 1 | 1 |
HL838625 | Chlorobium phaeovibrioides | 53.7170263788969 | 417.0 | predicted | 1 | 1 |
MV662722 | Chlorobium phaeovibrioides | 52.124183006536 | 612.0 | predicted | 1 | 1 |
MV662790 | Chlorobium phaeovibrioides | 52.1150592216582 | 591.0 | predicted | 1 | 1 |
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CREATE TABLE Marine_Sequences ( Sequence_accession_number TEXT PRIMARY KEY, Species_name TEXT, GC_content TEXT, Sequence_length TEXT, Sequence_status TEXT, Is_protein_coding_sequence INTEGER, Is_annotated INTEGER, FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name), FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number) );