Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
24 rows where Is_annotated = 1, Is_protein_coding_sequence = 1 and Species_name = "Idiomarina sp. h2"
This data as json, CSV (advanced)
Suggested facets: Sequence_length
Species_name 1
- Idiomarina sp. h2 · 24 ✖
Sequence_status 1
- predicted 24
Is_protein_coding_sequence 1
- 1 · 24 ✖
Is_annotated 1
- 1 · 24 ✖
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| HI675498 | Idiomarina sp. h2 | 40.9722222222222 | 288.0 | predicted | 1 | 1 |
| HI679327 | Idiomarina sp. h2 | 43.9024390243902 | 615.0 | predicted | 1 | 1 |
| HI682476 | Idiomarina sp. h2 | 48.1132075471698 | 1272.0 | predicted | 1 | 1 |
| HI689493 | Idiomarina sp. h2 | 43.6472346786248 | 669.0 | predicted | 1 | 1 |
| HI691073 | Idiomarina sp. h2 | 45.5284552845528 | 738.0 | predicted | 1 | 1 |
| HI691314 | Idiomarina sp. h2 | 44.2477876106195 | 339.0 | predicted | 1 | 1 |
| HI691315 | Idiomarina sp. h2 | 51.9174041297935 | 339.0 | predicted | 1 | 1 |
| HI692319 | Idiomarina sp. h2 | 46.5333333333333 | 1500.0 | predicted | 1 | 1 |
| HI696922 | Idiomarina sp. h2 | 49.4318181818182 | 1056.0 | predicted | 1 | 1 |
| HI698827 | Idiomarina sp. h2 | 50.3921568627451 | 1020.0 | predicted | 1 | 1 |
| HI699860 | Idiomarina sp. h2 | 49.5934959349593 | 1230.0 | predicted | 1 | 1 |
| HI916015 | Idiomarina sp. h2 | 48.3912483912484 | 777.0 | predicted | 1 | 1 |
| HI916210 | Idiomarina sp. h2 | 48.3809523809524 | 1050.0 | predicted | 1 | 1 |
| HI924842 | Idiomarina sp. h2 | 47.1544715447154 | 738.0 | predicted | 1 | 1 |
| HI932187 | Idiomarina sp. h2 | 46.4848484848485 | 1650.0 | predicted | 1 | 1 |
| HI936771 | Idiomarina sp. h2 | 51.1033681765389 | 861.0 | predicted | 1 | 1 |
| HI936958 | Idiomarina sp. h2 | 47.7611940298507 | 1005.0 | predicted | 1 | 1 |
| HI937142 | Idiomarina sp. h2 | 47.6372924648787 | 783.0 | predicted | 1 | 1 |
| HI937442 | Idiomarina sp. h2 | 43.8438438438438 | 666.0 | predicted | 1 | 1 |
| HK270572 | Idiomarina sp. h2 | 48.8050314465409 | 795.0 | predicted | 1 | 1 |
| HK430745 | Idiomarina sp. h2 | 43.7598736176935 | 633.0 | predicted | 1 | 1 |
| HK434561 | Idiomarina sp. h2 | 46.865671641791 | 1005.0 | predicted | 1 | 1 |
| HK438996 | Idiomarina sp. h2 | 44.5745511319282 | 1281.0 | predicted | 1 | 1 |
| HK446546 | Idiomarina sp. h2 | 51.0162601626016 | 492.0 | predicted | 1 | 1 |
Advanced export
JSON shape: default, array, newline-delimited, object
CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);