Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
7 rows where Is_annotated = 1, Is_protein_coding_sequence = 1 and Species_name = "Nitratireductor indicus c115"
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Species_name 1
- Nitratireductor indicus c115 · 7 ✖
Sequence_status 1
Is_protein_coding_sequence 1
- 1 · 7 ✖
Is_annotated 1
- 1 · 7 ✖
Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
---|---|---|---|---|---|---|
LY613107 | Nitratireductor indicus c115 | 62.2881355932203 | 1416.0 | predicted | 1 | 1 |
LY613387 | Nitratireductor indicus c115 | 62.0752984389348 | 1089.0 | predicted | 1 | 1 |
MV660278 | Nitratireductor indicus c115 | 59.6045197740113 | 3540.0 | predicted | 1 | 1 |
MV660852 | Nitratireductor indicus c115 | 61.2041467304625 | 2508.0 | predicted | 1 | 1 |
MV661388 | Nitratireductor indicus c115 | 56.6268486916951 | 3516.0 | predicted | 1 | 1 |
MV662002 | Nitratireductor indicus c115 | 55.5715658021134 | 2082.0 | predicted | 1 | 1 |
MV662451 | Nitratireductor indicus c115 | 56.7164179104478 | 603.0 | predicted | 1 | 1 |
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CREATE TABLE Marine_Sequences ( Sequence_accession_number TEXT PRIMARY KEY, Species_name TEXT, GC_content TEXT, Sequence_length TEXT, Sequence_status TEXT, Is_protein_coding_sequence INTEGER, Is_annotated INTEGER, FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name), FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number) );