Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
9 rows where Is_annotated = 1, Is_protein_coding_sequence = 1 and Species_name = "Vibrio anguillarum"
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These facets timed out: Sequence_status, Is_protein_coding_sequence, Species_name
Is_annotated 1
- 1 · 9 ✖
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| DD404486 | Vibrio anguillarum | 47.3684210526316 | 1140.0 | observed | 1 | 1 |
| GM962117 | Vibrio anguillarum | 43.3515482695811 | 1098.0 | observed | 1 | 1 |
| HB910784 | Vibrio anguillarum | 38.2039573820396 | 1314.0 | observed | 1 | 1 |
| HB910786 | Vibrio anguillarum | 39.009009009009 | 1110.0 | observed | 1 | 1 |
| HB910788 | Vibrio anguillarum | 37.9032258064516 | 1116.0 | observed | 1 | 1 |
| HB911520 | Vibrio anguillarum | 47.2279260780287 | 1461.0 | observed | 1 | 1 |
| HC891315 | Vibrio anguillarum | 41.6067146282974 | 834.0 | observed | 1 | 1 |
| HC910277 | Vibrio anguillarum | 43.6018957345972 | 633.0 | observed | 1 | 1 |
| HC910313 | Vibrio anguillarum | 40.2010050251256 | 597.0 | observed | 1 | 1 |
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CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);