Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
118 rows where Is_annotated = 1 and Sequence_length = "273.0"
This data as json, CSV (advanced)
Species_name 21
- Odobenus rosmarus divergens 80
- Physeter macrocephalus 15
- Alcanivorax sp. k 3
- Vibrio cholerae serotype 2
- Zobellia laminariae 2
- Jannaschia sp. 1
- Jannaschia sp. ccs1 1
- Methylophaga frappieri 1
- Photobacterium frigidiphilum 1
- Photobacterium sp. ska34 1
- Pseudoalteromonas marina dsm 17587 1
- Pseudoalteromonas tunicata d2 1
- Psychrobacter sp. dab_al43b 1
- Rhizophora mucronata 1
- Roseobacter denitrificans 1
- Ruegeria sp. tm1040 1
- Thermococcus sp. gr6 1
- Thermococcus sp. gr7 1
- Thermotoga petrophila 1
- Trichechus manatus latirostris 1
- Vibrio agarilyticus 1
Is_protein_coding_sequence 1
- 1 118
Is_annotated 1
- 1 · 118 ✖
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| DI189347 | Thermococcus sp. gr6 | 50.1831501831502 | 273.0 | predicted | 1 | 1 |
| DI189512 | Thermococcus sp. gr7 | 46.1538461538462 | 273.0 | predicted | 1 | 1 |
| GN120421 | Pseudoalteromonas tunicata d2 | 42.1245421245421 | 273.0 | observed | 1 | 1 |
| GN120425 | Photobacterium sp. ska34 | 42.8571428571428 | 273.0 | observed | 1 | 1 |
| GP193621 | Rhizophora mucronata | 45.0549450549451 | 273.0 | predicted | 1 | 1 |
| GZ267651 | Odobenus rosmarus divergens | 40.6593406593407 | 273.0 | predicted | 1 | 1 |
| HC911366 | Jannaschia sp. ccs1 | 60.0732600732601 | 273.0 | observed | 1 | 1 |
| HC911380 | Ruegeria sp. tm1040 | 59.3406593406593 | 273.0 | observed | 1 | 1 |
| HC911402 | Roseobacter denitrificans | 58.974358974359 | 273.0 | observed | 1 | 1 |
| HK081768 | Pseudoalteromonas marina dsm 17587 | 38.0952380952381 | 273.0 | predicted | 1 | 1 |
| HK431336 | Jannaschia sp. | 60.0732600732601 | 273.0 | predicted | 1 | 1 |
| HK450650 | Photobacterium frigidiphilum | 32.2344322344322 | 273.0 | predicted | 1 | 1 |
| HK523684 | Trichechus manatus latirostris | 54.2124542124542 | 273.0 | predicted | 1 | 1 |
| HK547395 | Odobenus rosmarus divergens | 56.7765567765568 | 273.0 | predicted | 1 | 1 |
| HK547396 | Odobenus rosmarus divergens | 50.9157509157509 | 273.0 | predicted | 1 | 1 |
| HK547397 | Odobenus rosmarus divergens | 56.7765567765568 | 273.0 | predicted | 1 | 1 |
| HK547398 | Odobenus rosmarus divergens | 50.9157509157509 | 273.0 | predicted | 1 | 1 |
| HK671463 | Thermotoga petrophila | 46.1538461538462 | 273.0 | predicted | 1 | 1 |
| HK891126 | Odobenus rosmarus divergens | 65.9340659340659 | 273.0 | predicted | 1 | 1 |
| HK894827 | Odobenus rosmarus divergens | 53.4798534798535 | 273.0 | predicted | 1 | 1 |
| HK898528 | Odobenus rosmarus divergens | 64.4688644688645 | 273.0 | predicted | 1 | 1 |
| HK902229 | Odobenus rosmarus divergens | 55.3113553113553 | 273.0 | predicted | 1 | 1 |
| HK905930 | Odobenus rosmarus divergens | 52.7472527472527 | 273.0 | predicted | 1 | 1 |
| HL066413 | Vibrio cholerae serotype | 45.4212454212454 | 273.0 | predicted | 1 | 1 |
| HL262177 | Odobenus rosmarus divergens | 55.3113553113553 | 273.0 | predicted | 1 | 1 |
| HL262178 | Odobenus rosmarus divergens | 52.7472527472527 | 273.0 | predicted | 1 | 1 |
| HL262179 | Odobenus rosmarus divergens | 44.3223443223443 | 273.0 | predicted | 1 | 1 |
| HL262180 | Odobenus rosmarus divergens | 49.8168498168498 | 273.0 | predicted | 1 | 1 |
| HL262181 | Odobenus rosmarus divergens | 53.1135531135531 | 273.0 | predicted | 1 | 1 |
| HL262182 | Odobenus rosmarus divergens | 46.5201465201465 | 273.0 | predicted | 1 | 1 |
| HL262183 | Odobenus rosmarus divergens | 48.3516483516484 | 273.0 | predicted | 1 | 1 |
| HL262184 | Odobenus rosmarus divergens | 50.9157509157509 | 273.0 | predicted | 1 | 1 |
| HL262185 | Odobenus rosmarus divergens | 47.985347985348 | 273.0 | predicted | 1 | 1 |
| HL262186 | Odobenus rosmarus divergens | 50.1831501831502 | 273.0 | predicted | 1 | 1 |
| HL262187 | Odobenus rosmarus divergens | 52.3809523809524 | 273.0 | predicted | 1 | 1 |
| HL262188 | Odobenus rosmarus divergens | 54.9450549450549 | 273.0 | predicted | 1 | 1 |
| HL262189 | Odobenus rosmarus divergens | 53.1135531135531 | 273.0 | predicted | 1 | 1 |
| HL262190 | Odobenus rosmarus divergens | 49.4505494505495 | 273.0 | predicted | 1 | 1 |
| HL262191 | Odobenus rosmarus divergens | 51.2820512820513 | 273.0 | predicted | 1 | 1 |
| HL262192 | Odobenus rosmarus divergens | 52.014652014652 | 273.0 | predicted | 1 | 1 |
| HL262193 | Odobenus rosmarus divergens | 50.5494505494505 | 273.0 | predicted | 1 | 1 |
| HL262194 | Odobenus rosmarus divergens | 48.3516483516484 | 273.0 | predicted | 1 | 1 |
| HL262195 | Odobenus rosmarus divergens | 47.6190476190476 | 273.0 | predicted | 1 | 1 |
| HL262196 | Odobenus rosmarus divergens | 51.6483516483516 | 273.0 | predicted | 1 | 1 |
| HL262197 | Odobenus rosmarus divergens | 52.7472527472527 | 273.0 | predicted | 1 | 1 |
| HL262198 | Odobenus rosmarus divergens | 52.3809523809524 | 273.0 | predicted | 1 | 1 |
| HL262199 | Odobenus rosmarus divergens | 54.9450549450549 | 273.0 | predicted | 1 | 1 |
| HL262200 | Odobenus rosmarus divergens | 49.0842490842491 | 273.0 | predicted | 1 | 1 |
| HL262201 | Odobenus rosmarus divergens | 54.2124542124542 | 273.0 | predicted | 1 | 1 |
| HL262202 | Odobenus rosmarus divergens | 54.5787545787546 | 273.0 | predicted | 1 | 1 |
| HL262203 | Odobenus rosmarus divergens | 54.5787545787546 | 273.0 | predicted | 1 | 1 |
| HL262204 | Odobenus rosmarus divergens | 51.6483516483516 | 273.0 | predicted | 1 | 1 |
| HL262205 | Odobenus rosmarus divergens | 50.5494505494505 | 273.0 | predicted | 1 | 1 |
| HL262206 | Odobenus rosmarus divergens | 50.5494505494505 | 273.0 | predicted | 1 | 1 |
| HL262207 | Odobenus rosmarus divergens | 54.9450549450549 | 273.0 | predicted | 1 | 1 |
| HL262208 | Odobenus rosmarus divergens | 50.1831501831502 | 273.0 | predicted | 1 | 1 |
| HL262209 | Odobenus rosmarus divergens | 50.1831501831502 | 273.0 | predicted | 1 | 1 |
| HL262210 | Odobenus rosmarus divergens | 54.2124542124542 | 273.0 | predicted | 1 | 1 |
| HL262211 | Odobenus rosmarus divergens | 55.3113553113553 | 273.0 | predicted | 1 | 1 |
| HL262212 | Odobenus rosmarus divergens | 55.6776556776557 | 273.0 | predicted | 1 | 1 |
| HL262213 | Odobenus rosmarus divergens | 54.5787545787546 | 273.0 | predicted | 1 | 1 |
| HL262214 | Odobenus rosmarus divergens | 52.7472527472527 | 273.0 | predicted | 1 | 1 |
| HL262215 | Odobenus rosmarus divergens | 53.4798534798535 | 273.0 | predicted | 1 | 1 |
| HL262216 | Odobenus rosmarus divergens | 52.014652014652 | 273.0 | predicted | 1 | 1 |
| HL262217 | Odobenus rosmarus divergens | 50.9157509157509 | 273.0 | predicted | 1 | 1 |
| HL262218 | Odobenus rosmarus divergens | 54.2124542124542 | 273.0 | predicted | 1 | 1 |
| HL262219 | Odobenus rosmarus divergens | 53.1135531135531 | 273.0 | predicted | 1 | 1 |
| HL262220 | Odobenus rosmarus divergens | 52.7472527472527 | 273.0 | predicted | 1 | 1 |
| HL262221 | Odobenus rosmarus divergens | 52.014652014652 | 273.0 | predicted | 1 | 1 |
| HL262222 | Odobenus rosmarus divergens | 48.7179487179487 | 273.0 | predicted | 1 | 1 |
| HL262223 | Odobenus rosmarus divergens | 51.6483516483516 | 273.0 | predicted | 1 | 1 |
| HL262224 | Odobenus rosmarus divergens | 50.9157509157509 | 273.0 | predicted | 1 | 1 |
| HL262225 | Odobenus rosmarus divergens | 53.4798534798535 | 273.0 | predicted | 1 | 1 |
| HL262226 | Odobenus rosmarus divergens | 43.5897435897436 | 273.0 | predicted | 1 | 1 |
| HL647266 | Odobenus rosmarus divergens | 57.1428571428571 | 273.0 | predicted | 1 | 1 |
| HL647840 | Odobenus rosmarus divergens | 70.6959706959707 | 273.0 | predicted | 1 | 1 |
| HL656030 | Odobenus rosmarus divergens | 45.7875457875458 | 273.0 | predicted | 1 | 1 |
| HL656604 | Odobenus rosmarus divergens | 58.2417582417582 | 273.0 | predicted | 1 | 1 |
| HL664794 | Odobenus rosmarus divergens | 57.1428571428571 | 273.0 | predicted | 1 | 1 |
| HL665368 | Odobenus rosmarus divergens | 66.3003663003663 | 273.0 | predicted | 1 | 1 |
| HL673558 | Odobenus rosmarus divergens | 49.0842490842491 | 273.0 | predicted | 1 | 1 |
| HL674132 | Odobenus rosmarus divergens | 60.8058608058608 | 273.0 | predicted | 1 | 1 |
| HL682322 | Odobenus rosmarus divergens | 45.7875457875458 | 273.0 | predicted | 1 | 1 |
| HL682896 | Odobenus rosmarus divergens | 58.974358974359 | 273.0 | predicted | 1 | 1 |
| HL840234 | Methylophaga frappieri | 66.6666666666667 | 273.0 | predicted | 1 | 1 |
| HL840238 | Alcanivorax sp. k | 69.5970695970696 | 273.0 | predicted | 1 | 1 |
| HL840274 | Alcanivorax sp. k | 70.3296703296703 | 273.0 | predicted | 1 | 1 |
| HL840276 | Alcanivorax sp. k | 69.5970695970696 | 273.0 | predicted | 1 | 1 |
| HZ285821 | Odobenus rosmarus divergens | 61.1721611721612 | 273.0 | predicted | 1 | 1 |
| HZ293809 | Odobenus rosmarus divergens | 47.985347985348 | 273.0 | predicted | 1 | 1 |
| HZ301797 | Odobenus rosmarus divergens | 58.974358974359 | 273.0 | predicted | 1 | 1 |
| HZ309785 | Odobenus rosmarus divergens | 49.8168498168498 | 273.0 | predicted | 1 | 1 |
| HZ317773 | Odobenus rosmarus divergens | 45.7875457875458 | 273.0 | predicted | 1 | 1 |
| HZ885033 | Vibrio agarilyticus | 38.4615384615385 | 273.0 | predicted | 1 | 1 |
| LF449454 | Physeter macrocephalus | 65.9340659340659 | 273.0 | predicted | 1 | 1 |
| LF454661 | Odobenus rosmarus divergens | 68.8644688644689 | 273.0 | predicted | 1 | 1 |
| LF460327 | Physeter macrocephalus | 60.4395604395604 | 273.0 | predicted | 1 | 1 |
| LF468115 | Physeter macrocephalus | 56.7765567765568 | 273.0 | predicted | 1 | 1 |
| LF484852 | Physeter macrocephalus | 54.2124542124542 | 273.0 | predicted | 1 | 1 |
| LF490059 | Odobenus rosmarus divergens | 56.4102564102564 | 273.0 | predicted | 1 | 1 |
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CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);