Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
8 rows where Is_annotated = 1 and Species_name = "Alcanivorax"
This data as json, CSV (advanced)
Species_name 1
- Alcanivorax · 8 ✖
Sequence_status 1
- observed 8
Is_protein_coding_sequence 1
- 1 8
Is_annotated 1
- 1 · 8 ✖
Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
---|---|---|---|---|---|---|
HC508342 | Alcanivorax | 62.2775800711744 | 1686.0 | observed | 1 | 1 |
JD018675 | Alcanivorax | 60.0680272108844 | 1470.0 | observed | 1 | 1 |
JD018676 | Alcanivorax | 58.7606837606838 | 1404.0 | observed | 1 | 1 |
LP124785 | Alcanivorax | 57.9124579124579 | 3564.0 | observed | 1 | 1 |
LP125921 | Alcanivorax | 58.179012345679 | 2592.0 | observed | 1 | 1 |
LP126995 | Alcanivorax | 53.6219581211092 | 3534.0 | observed | 1 | 1 |
LP128304 | Alcanivorax | 53.8311371400683 | 2049.0 | observed | 1 | 1 |
LP129189 | Alcanivorax | 55.8974358974359 | 585.0 | observed | 1 | 1 |
Advanced export
JSON shape: default, array, newline-delimited, object
CREATE TABLE Marine_Sequences ( Sequence_accession_number TEXT PRIMARY KEY, Species_name TEXT, GC_content TEXT, Sequence_length TEXT, Sequence_status TEXT, Is_protein_coding_sequence INTEGER, Is_annotated INTEGER, FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name), FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number) );