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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

92 rows where Is_annotated = 1 and Species_name = "Idiomarina loihiensis l2tr"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
FB333527 Idiomarina loihiensis l2tr 49.6615905245347 1182.0 observed 1 1
FB333784 Idiomarina loihiensis l2tr 47.6851851851852 864.0 observed 1 1
FB334381 Idiomarina loihiensis l2tr 45.6066945606695 2151.0 observed 1 1
FB335186 Idiomarina loihiensis l2tr 45.6072351421189 774.0 observed 1 1
GM955787 Idiomarina loihiensis l2tr 48.4672474991933 3099.0 observed 1 1
GM960793 Idiomarina loihiensis l2tr 43.6472346786248 669.0 observed 1 1
GN098880 Idiomarina loihiensis l2tr 38.8451443569554 1143.0 observed 1 1
HB897632 Idiomarina loihiensis l2tr 51.4382402707276 591.0 observed 1 1
HB897969 Idiomarina loihiensis l2tr 40.9722222222222 288.0 observed 1 1
HB899745 Idiomarina loihiensis l2tr 48.2804232804233 1512.0 observed 1 1
HB901706 Idiomarina loihiensis l2tr 49.9727223131478 1833.0 observed 1 1
HB904047 Idiomarina loihiensis l2tr 46.1479786422578 1311.0 observed 1 1
HB904049 Idiomarina loihiensis l2tr 50.8599508599509 1221.0 observed 1 1
HB905088 Idiomarina loihiensis l2tr 50.1165501165501 429.0 observed 1 1
HB905700 Idiomarina loihiensis l2tr 43.9024390243902 615.0 observed 1 1
HB906164 Idiomarina loihiensis l2tr 45.6140350877193 1425.0 observed 1 1
HB906166 Idiomarina loihiensis l2tr 47.8017585931255 1251.0 observed 1 1
HB906168 Idiomarina loihiensis l2tr 48.7955182072829 1785.0 observed 1 1
HB907358 Idiomarina loihiensis l2tr 48.1707317073171 984.0 observed 1 1
HB908259 Idiomarina loihiensis l2tr 44.8493683187561 2058.0 observed 1 1
HB909711 Idiomarina loihiensis l2tr 50.1016260162602 984.0 observed 1 1
HB911362 Idiomarina loihiensis l2tr 50.817341862118 1407.0 observed 1 1
HB911364 Idiomarina loihiensis l2tr 49.5898583146905 1341.0 observed 1 1
HB911672 Idiomarina loihiensis l2tr 46.1333333333333 375.0 observed 1 1
HB911886 Idiomarina loihiensis l2tr 43.7275985663082 279.0 observed 1 1
HB912034 Idiomarina loihiensis l2tr 48.1132075471698 1272.0 observed 1 1
HB912036 Idiomarina loihiensis l2tr 43.6893203883495 1236.0 observed 1 1
HB912145 Idiomarina loihiensis l2tr 43.4456928838951 267.0 observed 1 1
HB912373 Idiomarina loihiensis l2tr 45.1741293532338 1005.0 observed 1 1
HB912848 Idiomarina loihiensis l2tr 53.6908881199539 3468.0 observed 1 1
HB913175 Idiomarina loihiensis l2tr 50.1449275362319 1035.0 observed 1 1
HB913387 Idiomarina loihiensis l2tr 48.9817792068596 933.0 observed 1 1
HB914222 Idiomarina loihiensis l2tr 51.8518518518519 864.0 observed 1 1
HB917100 Idiomarina loihiensis l2tr 51.5658515658516 2331.0 observed 1 1
HB917503 Idiomarina loihiensis l2tr 48.6772486772487 2268.0 observed 1 1
HB920828 Idiomarina loihiensis l2tr 50.0 960.0 observed 1 1
HB929310 Idiomarina loihiensis l2tr 45.5284552845528 738.0 observed 1 1
HB929796 Idiomarina loihiensis l2tr 44.2477876106195 339.0 observed 1 1
HB929798 Idiomarina loihiensis l2tr 51.9174041297935 339.0 observed 1 1
HB931822 Idiomarina loihiensis l2tr 46.5333333333333 1500.0 observed 1 1
HB934101 Idiomarina loihiensis l2tr 46.3768115942029 759.0 observed 1 1
HB934588 Idiomarina loihiensis l2tr 46.1187214611872 219.0 observed 1 1
HB935351 Idiomarina loihiensis l2tr 50.5112474437628 1956.0 observed 1 1
HB939628 Idiomarina loihiensis l2tr 49.5132127955494 2157.0 observed 1 1
HB939630 Idiomarina loihiensis l2tr 47.8138222849083 2127.0 observed 1 1
HB941068 Idiomarina loihiensis l2tr 49.4318181818182 1056.0 observed 1 1
HB941783 Idiomarina loihiensis l2tr 49.7104247104247 3108.0 observed 1 1
HB943073 Idiomarina loihiensis l2tr 46.2564102564103 975.0 observed 1 1
HB943977 Idiomarina loihiensis l2tr 51.2104283054004 537.0 observed 1 1
HB944894 Idiomarina loihiensis l2tr 50.3921568627451 1020.0 observed 1 1
HB946120 Idiomarina loihiensis l2tr 50.5703422053232 1578.0 observed 1 1
HB946973 Idiomarina loihiensis l2tr 50.3127792672029 1119.0 observed 1 1
HB946977 Idiomarina loihiensis l2tr 49.5934959349593 1230.0 observed 1 1
HB949250 Idiomarina loihiensis l2tr 51.3182674199623 1062.0 observed 1 1
HB949697 Idiomarina loihiensis l2tr 50.0904159132007 1659.0 observed 1 1
HB951698 Idiomarina loihiensis l2tr 47.2727272727273 825.0 observed 1 1
HB951700 Idiomarina loihiensis l2tr 52.9251700680272 735.0 observed 1 1
HB951702 Idiomarina loihiensis l2tr 48.3912483912484 777.0 observed 1 1
HB952093 Idiomarina loihiensis l2tr 48.3809523809524 1050.0 observed 1 1
HB955257 Idiomarina loihiensis l2tr 43.015873015873 1260.0 observed 1 1
HB957190 Idiomarina loihiensis l2tr 49.9343832020997 1524.0 observed 1 1
HB958292 Idiomarina loihiensis l2tr 47.9240806642942 1686.0 observed 1 1
HB961644 Idiomarina loihiensis l2tr 50.5185185185185 675.0 observed 1 1
HB961646 Idiomarina loihiensis l2tr 47.1544715447154 738.0 observed 1 1
HB962368 Idiomarina loihiensis l2tr 49.5884773662551 972.0 observed 1 1
HB965485 Idiomarina loihiensis l2tr 45.4794520547945 2190.0 observed 1 1
HB965487 Idiomarina loihiensis l2tr 48.8725490196078 2040.0 observed 1 1
HB966599 Idiomarina loihiensis l2tr 45.5913978494624 465.0 observed 1 1
HB967916 Idiomarina loihiensis l2tr 46.4848484848485 1650.0 observed 1 1
HB969691 Idiomarina loihiensis l2tr 54.1916167664671 1002.0 observed 1 1
HB970629 Idiomarina loihiensis l2tr 49.3630573248408 942.0 observed 1 1
HB971569 Idiomarina loihiensis l2tr 47.8853046594982 1395.0 observed 1 1
HB972063 Idiomarina loihiensis l2tr 46.9640644361834 807.0 observed 1 1
HB972463 Idiomarina loihiensis l2tr 42.3280423280423 189.0 observed 1 1
HB973429 Idiomarina loihiensis l2tr 50.9803921568627 663.0 observed 1 1
HB973795 Idiomarina loihiensis l2tr 51.1033681765389 861.0 observed 1 1
HB974175 Idiomarina loihiensis l2tr 47.7611940298507 1005.0 observed 1 1
HB974363 Idiomarina loihiensis l2tr 50.0674763832659 741.0 observed 1 1
HB974365 Idiomarina loihiensis l2tr 47.6372924648787 783.0 observed 1 1
HB974810 Idiomarina loihiensis l2tr 43.8438438438438 666.0 observed 1 1
HC903877 Idiomarina loihiensis l2tr 48.5523385300668 1347.0 observed 1 1
HC906535 Idiomarina loihiensis l2tr 46.4080459770115 696.0 observed 1 1
HC910169 Idiomarina loihiensis l2tr 43.8423645320197 609.0 observed 1 1
HC910171 Idiomarina loihiensis l2tr 43.7598736176935 633.0 observed 1 1
HC910173 Idiomarina loihiensis l2tr 48.4536082474227 582.0 observed 1 1
HC910175 Idiomarina loihiensis l2tr 47.870778267254 681.0 observed 1 1
HC910425 Idiomarina loihiensis l2tr 49.7652582159624 639.0 observed 1 1
HC911298 Idiomarina loihiensis l2tr 51.8151815181518 303.0 observed 1 1
HC916435 Idiomarina loihiensis l2tr 49.5176848874598 933.0 observed 1 1
HH769721 Idiomarina loihiensis l2tr 45.6609894566099 1233.0 observed 1 1
HH770810 Idiomarina loihiensis l2tr 45.462962962963 1080.0 observed 1 1
HV120266 Idiomarina loihiensis l2tr 48.8050314465409 795.0 observed 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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