Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
6 rows where Is_annotated = 1 and Species_name = "Isochrysis galbana"
This data as json, CSV (advanced)
These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| DM002963 | Isochrysis galbana | 55.6809631301731 | 1329.0 | observed | 1 | 1 |
| FW503559 | Isochrysis galbana | 64.4341801385681 | 1299.0 | observed | 1 | 1 |
| FW503560 | Isochrysis galbana | 64.5111624326405 | 1299.0 | observed | 1 | 1 |
| HV338437 | Isochrysis galbana | 58.1724581724582 | 777.0 | observed | 1 | 1 |
| HV704719 | Isochrysis galbana | 58.2070707070707 | 792.0 | observed | 1 | 1 |
| JA396565 | Isochrysis galbana | 63.5063957863055 | 1329.0 | observed | 1 | 1 |
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CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);