Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
23 rows where Is_annotated = 1 and Species_name = "Oncorhynchus mykiss"
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These facets timed out: Sequence_status, Is_protein_coding_sequence
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| DD146977 | Oncorhynchus mykiss | 47.0489038785835 | 593.0 | observed | 1 | 1 |
| DD287600 | Oncorhynchus mykiss | 47.1354166666667 | 384.0 | observed | 1 | 1 |
| DD287603 | Oncorhynchus mykiss | 52.020202020202 | 198.0 | observed | 1 | 1 |
| DD287609 | Oncorhynchus mykiss | 48.1152993348115 | 451.0 | observed | 1 | 1 |
| DD287611 | Oncorhynchus mykiss | 52.020202020202 | 198.0 | observed | 1 | 1 |
| E02630 | Oncorhynchus mykiss | 52.60663507109 | 633.0 | observed | 1 | 1 |
| E02631 | Oncorhynchus mykiss | 52.7646129541864 | 633.0 | observed | 1 | 1 |
| E02632 | Oncorhynchus mykiss | 52.9225908372828 | 633.0 | observed | 1 | 1 |
| E02633 | Oncorhynchus mykiss | 52.7336860670194 | 567.0 | observed | 1 | 1 |
| GM743329 | Oncorhynchus mykiss | 50.1201923076923 | 832.0 | observed | 1 | 1 |
| HH769994 | Oncorhynchus mykiss | 52.1577380952381 | 1344.0 | observed | 1 | 1 |
| HV338461 | Oncorhynchus mykiss | 49.937106918239 | 795.0 | observed | 1 | 1 |
| HV338462 | Oncorhynchus mykiss | 46.8926553672316 | 885.0 | observed | 1 | 1 |
| LZ221732 | Oncorhynchus mykiss | 57.6190476190476 | 420.0 | observed | 1 | 1 |
| LZ221738 | Oncorhynchus mykiss | 57.4789915966387 | 1785.0 | observed | 1 | 1 |
| LZ221740 | Oncorhynchus mykiss | 57.9889807162534 | 726.0 | observed | 1 | 1 |
| LZ221769 | Oncorhynchus mykiss | 54.7215496368039 | 1239.0 | observed | 1 | 1 |
| LZ221770 | Oncorhynchus mykiss | 56.2053281351527 | 1539.0 | observed | 1 | 1 |
| LZ221772 | Oncorhynchus mykiss | 52.7777777777778 | 828.0 | observed | 1 | 1 |
| LZ221775 | Oncorhynchus mykiss | 58.9171974522293 | 942.0 | observed | 1 | 1 |
| LZ221776 | Oncorhynchus mykiss | 53.1627576403696 | 1407.0 | observed | 1 | 1 |
| LZ221786 | Oncorhynchus mykiss | 51.9900497512438 | 402.0 | observed | 1 | 1 |
| LZ221794 | Oncorhynchus mykiss | 47.6510067114094 | 447.0 | observed | 1 | 1 |
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CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);