Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
7 rows where Is_annotated = 1 and Species_name = "Thiocapsa roseopersicina"
This data as json, CSV (advanced)
These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| GM953708 | Thiocapsa roseopersicina | 64.2642642642643 | 666.0 | observed | 1 | 1 |
| HB878226 | Thiocapsa roseopersicina | 65.2719665271967 | 717.0 | observed | 1 | 1 |
| HB880818 | Thiocapsa roseopersicina | 68.396770472895 | 867.0 | observed | 1 | 1 |
| HB907209 | Thiocapsa roseopersicina | 65.2777777777778 | 720.0 | observed | 1 | 1 |
| HB943111 | Thiocapsa roseopersicina | 63.477366255144 | 972.0 | observed | 1 | 1 |
| HB959733 | Thiocapsa roseopersicina | 65.6195462478185 | 1146.0 | observed | 1 | 1 |
| HC496899 | Thiocapsa roseopersicina | 66.5837479270315 | 1206.0 | observed | 1 | 1 |
Advanced export
JSON shape: default, array, newline-delimited, object
CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);