Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
120 rows where Is_protein_coding_sequence = 0, Sequence_status = "observed" and Species_name = "Nannochloropsis oculata"
This data as json, CSV (advanced)
Species_name 1
- Nannochloropsis oculata · 120 ✖
Sequence_status 1
- observed · 120 ✖
Is_protein_coding_sequence 1
- - · 120 ✖
Is_annotated 1
- 0 120
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| JA723301 | Nannochloropsis oculata | 54.769392033543 | 1908.0 | observed | 0 | 0 |
| JA723304 | Nannochloropsis oculata | 50.6453048509123 | 2247.0 | observed | 0 | 0 |
| JA723310 | Nannochloropsis oculata | 54.1073384446878 | 1826.0 | observed | 0 | 0 |
| JA723313 | Nannochloropsis oculata | 52.343308865048 | 1771.0 | observed | 0 | 0 |
| JA723316 | Nannochloropsis oculata | 57.0909090909091 | 1100.0 | observed | 0 | 0 |
| JA723319 | Nannochloropsis oculata | 50.0 | 1772.0 | observed | 0 | 0 |
| JA723325 | Nannochloropsis oculata | 51.7712865133623 | 1609.0 | observed | 0 | 0 |
| JA723328 | Nannochloropsis oculata | 54.3400713436385 | 1682.0 | observed | 0 | 0 |
| JA723331 | Nannochloropsis oculata | 52.3634453781513 | 1904.0 | observed | 0 | 0 |
| JA723334 | Nannochloropsis oculata | 50.9544787077827 | 1362.0 | observed | 0 | 0 |
| JA723337 | Nannochloropsis oculata | 51.6393442622951 | 2074.0 | observed | 0 | 0 |
| JA723340 | Nannochloropsis oculata | 52.0504731861199 | 1585.0 | observed | 0 | 0 |
| JA723343 | Nannochloropsis oculata | 52.3140925637026 | 1923.0 | observed | 0 | 0 |
| JA723355 | Nannochloropsis oculata | 53.4959349593496 | 2460.0 | observed | 0 | 0 |
| JA723402 | Nannochloropsis oculata | 50.3557312252964 | 1265.0 | observed | 0 | 0 |
| LF146145 | Nannochloropsis oculata | 49.0 | 1000.0 | observed | 0 | 0 |
| LF146154 | Nannochloropsis oculata | 54.5 | 800.0 | observed | 0 | 0 |
| LF146155 | Nannochloropsis oculata | 44.2088091353997 | 613.0 | observed | 0 | 0 |
| LF146160 | Nannochloropsis oculata | 68.6868686868687 | 99.0 | observed | 0 | 0 |
| LF146161 | Nannochloropsis oculata | 56.0 | 900.0 | observed | 0 | 0 |
| LF158498 | Nannochloropsis oculata | 49.0 | 1000.0 | observed | 0 | 0 |
| LF158513 | Nannochloropsis oculata | 54.5 | 800.0 | observed | 0 | 0 |
| LF158514 | Nannochloropsis oculata | 68.6868686868687 | 99.0 | observed | 0 | 0 |
| LF158515 | Nannochloropsis oculata | 44.2088091353997 | 613.0 | observed | 0 | 0 |
| LV542573 | Nannochloropsis oculata | 49.0 | 1000.0 | observed | 0 | 0 |
| LV542604 | Nannochloropsis oculata | 54.5 | 800.0 | observed | 0 | 0 |
| LV542605 | Nannochloropsis oculata | 56.2462281231141 | 1657.0 | observed | 0 | 0 |
| LV571696 | Nannochloropsis oculata | 49.0 | 1000.0 | observed | 0 | 0 |
| LV571727 | Nannochloropsis oculata | 54.5 | 800.0 | observed | 0 | 0 |
| LV571728 | Nannochloropsis oculata | 56.2462281231141 | 1657.0 | observed | 0 | 0 |
| LV571793 | Nannochloropsis oculata | 49.0 | 1000.0 | observed | 0 | 0 |
| LV571794 | Nannochloropsis oculata | 54.5 | 800.0 | observed | 0 | 0 |
| LV571795 | Nannochloropsis oculata | 44.2088091353997 | 613.0 | observed | 0 | 0 |
| LV571811 | Nannochloropsis oculata | 54.5548654244306 | 966.0 | observed | 0 | 0 |
| LX063601 | Nannochloropsis oculata | 49.0 | 1000.0 | observed | 0 | 0 |
| LX063608 | Nannochloropsis oculata | 54.5 | 800.0 | observed | 0 | 0 |
| LX063645 | Nannochloropsis oculata | 57.1333333333333 | 1500.0 | observed | 0 | 0 |
| LX063836 | Nannochloropsis oculata | 49.0 | 1000.0 | observed | 0 | 0 |
| LX063843 | Nannochloropsis oculata | 54.5 | 800.0 | observed | 0 | 0 |
| LX063865 | Nannochloropsis oculata | 55.0 | 1500.0 | observed | 0 | 0 |
| LX076973 | Nannochloropsis oculata | 49.0 | 1000.0 | observed | 0 | 0 |
| LX076980 | Nannochloropsis oculata | 54.5 | 800.0 | observed | 0 | 0 |
| LX077017 | Nannochloropsis oculata | 57.1333333333333 | 1500.0 | observed | 0 | 0 |
| LX077039 | Nannochloropsis oculata | 49.0 | 1000.0 | observed | 0 | 0 |
| LX077046 | Nannochloropsis oculata | 54.5 | 800.0 | observed | 0 | 0 |
| LX077068 | Nannochloropsis oculata | 55.0 | 1500.0 | observed | 0 | 0 |
| LX157494 | Nannochloropsis oculata | 55.7409224730128 | 1019.0 | observed | 0 | 0 |
| LX157495 | Nannochloropsis oculata | 48.9051094890511 | 959.0 | observed | 0 | 0 |
| LX157496 | Nannochloropsis oculata | 49.0927419354839 | 992.0 | observed | 0 | 0 |
| LX157497 | Nannochloropsis oculata | 54.043392504931 | 1014.0 | observed | 0 | 0 |
| LX157498 | Nannochloropsis oculata | 53.2467532467533 | 1001.0 | observed | 0 | 0 |
| LZ230698 | Nannochloropsis oculata | 49.0 | 1000.0 | observed | 0 | 0 |
| LZ230733 | Nannochloropsis oculata | 50.4 | 1000.0 | observed | 0 | 0 |
| LZ230734 | Nannochloropsis oculata | 56.2 | 1000.0 | observed | 0 | 0 |
| LZ230735 | Nannochloropsis oculata | 48.6 | 1000.0 | observed | 0 | 0 |
| LZ238204 | Nannochloropsis oculata | 49.0 | 1000.0 | observed | 0 | 0 |
| LZ238239 | Nannochloropsis oculata | 50.4 | 1000.0 | observed | 0 | 0 |
| LZ238240 | Nannochloropsis oculata | 56.2 | 1000.0 | observed | 0 | 0 |
| LZ238241 | Nannochloropsis oculata | 48.6 | 1000.0 | observed | 0 | 0 |
| LZ952010 | Nannochloropsis oculata | 49.0 | 1000.0 | observed | 0 | 0 |
| LZ952019 | Nannochloropsis oculata | 54.5 | 800.0 | observed | 0 | 0 |
| LZ952020 | Nannochloropsis oculata | 44.2088091353997 | 613.0 | observed | 0 | 0 |
| LZ952027 | Nannochloropsis oculata | 68.6868686868687 | 99.0 | observed | 0 | 0 |
| LZ952035 | Nannochloropsis oculata | 55.4 | 1000.0 | observed | 0 | 0 |
| LZ983259 | Nannochloropsis oculata | 49.0 | 1000.0 | observed | 0 | 0 |
| LZ983268 | Nannochloropsis oculata | 54.5 | 800.0 | observed | 0 | 0 |
| LZ983269 | Nannochloropsis oculata | 44.2088091353997 | 613.0 | observed | 0 | 0 |
| LZ983276 | Nannochloropsis oculata | 68.6868686868687 | 99.0 | observed | 0 | 0 |
| LZ983284 | Nannochloropsis oculata | 55.4 | 1000.0 | observed | 0 | 0 |
| MA142596 | Nannochloropsis oculata | 49.0 | 1000.0 | observed | 0 | 0 |
| MA142613 | Nannochloropsis oculata | 54.5 | 800.0 | observed | 0 | 0 |
| MA142614 | Nannochloropsis oculata | 44.2088091353997 | 613.0 | observed | 0 | 0 |
| MA142627 | Nannochloropsis oculata | 53.4 | 1000.0 | observed | 0 | 0 |
| MA142628 | Nannochloropsis oculata | 54.8 | 1000.0 | observed | 0 | 0 |
| MA142629 | Nannochloropsis oculata | 52.9 | 1000.0 | observed | 0 | 0 |
| MA142630 | Nannochloropsis oculata | 52.5 | 1000.0 | observed | 0 | 0 |
| MA142631 | Nannochloropsis oculata | 56.0 | 1000.0 | observed | 0 | 0 |
| MA142640 | Nannochloropsis oculata | 49.6 | 1000.0 | observed | 0 | 0 |
| MA344107 | Nannochloropsis oculata | 49.0 | 1000.0 | observed | 0 | 0 |
| MA344116 | Nannochloropsis oculata | 54.5 | 800.0 | observed | 0 | 0 |
| MA344117 | Nannochloropsis oculata | 44.2088091353997 | 613.0 | observed | 0 | 0 |
| MA344121 | Nannochloropsis oculata | 68.6868686868687 | 99.0 | observed | 0 | 0 |
| MA344156 | Nannochloropsis oculata | 53.2 | 1000.0 | observed | 0 | 0 |
| MA344157 | Nannochloropsis oculata | 50.6396588486141 | 938.0 | observed | 0 | 0 |
| MA377443 | Nannochloropsis oculata | 49.501246882793 | 802.0 | observed | 0 | 0 |
| MA377444 | Nannochloropsis oculata | 44.7900466562986 | 643.0 | observed | 0 | 0 |
| MA377451 | Nannochloropsis oculata | 53.5321821036107 | 5096.0 | observed | 0 | 0 |
| MA377452 | Nannochloropsis oculata | 53.625081645983 | 1531.0 | observed | 0 | 0 |
| MA377453 | Nannochloropsis oculata | 54.3683218101823 | 1591.0 | observed | 0 | 0 |
| MA377467 | Nannochloropsis oculata | 54.8823529411765 | 3400.0 | observed | 0 | 0 |
| MA377468 | Nannochloropsis oculata | 54.7586206896552 | 1450.0 | observed | 0 | 0 |
| MA377469 | Nannochloropsis oculata | 55.1388888888889 | 1440.0 | observed | 0 | 0 |
| MA377474 | Nannochloropsis oculata | 53.9444444444444 | 3600.0 | observed | 0 | 0 |
| MA377475 | Nannochloropsis oculata | 55.6603773584906 | 1590.0 | observed | 0 | 0 |
| MA377476 | Nannochloropsis oculata | 51.2903225806452 | 1550.0 | observed | 0 | 0 |
| MA379447 | Nannochloropsis oculata | 49.501246882793 | 802.0 | observed | 0 | 0 |
| MA379448 | Nannochloropsis oculata | 44.7900466562986 | 643.0 | observed | 0 | 0 |
| MA379455 | Nannochloropsis oculata | 53.5321821036107 | 5096.0 | observed | 0 | 0 |
| MA379456 | Nannochloropsis oculata | 53.625081645983 | 1531.0 | observed | 0 | 0 |
| MA379457 | Nannochloropsis oculata | 54.3683218101823 | 1591.0 | observed | 0 | 0 |
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CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);