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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

45 rows where Is_protein_coding_sequence = 0 and Species_name = "Aeromonas salmonicida"

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Suggested facets: GC_content, Sequence_length

Species_name 1

  • Aeromonas salmonicida · 45 ✖

Sequence_status 1

  • observed 45

Is_protein_coding_sequence 1

  • - · 45 ✖

Is_annotated 1

  • 0 45
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
AX048458 Aeromonas salmonicida 50.4761904761905 315.0 observed 0 0
AX048459 Aeromonas salmonicida 50.4761904761905 315.0 observed 0 0
BD395374 Aeromonas salmonicida 50.4761904761905 315.0 observed 0 0
BD395375 Aeromonas salmonicida 50.4761904761905 315.0 observed 0 0
CQ882230 Aeromonas salmonicida 60.4352126607319 1011.0 observed 0 0
CQ924801 Aeromonas salmonicida 60.4352126607319 1011.0 observed 0 0
CS469758 Aeromonas salmonicida 60.4352126607319 1011.0 observed 0 0
CS493038 Aeromonas salmonicida 60.4352126607319 1011.0 observed 0 0
DD432324 Aeromonas salmonicida 60.4352126607319 1011.0 observed 0 0
DD441577 Aeromonas salmonicida 60.4352126607319 1011.0 observed 0 0
DD496153 Aeromonas salmonicida 60.4352126607319 1011.0 observed 0 0
DD496191 Aeromonas salmonicida 60.4352126607319 1011.0 observed 0 0
HB870127 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HB872699 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HB873823 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HB876074 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HB878468 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HB879157 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HB880204 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HB882493 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HB884769 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HB890358 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HB898432 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HB902225 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HC927536 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HC930108 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HC931232 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HC933483 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HC935877 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HC936566 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HC937613 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HC939902 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HC942178 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HC947767 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HC955841 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HC959634 Aeromonas salmonicida 56.6831683168317 1212.0 observed 0 0
HV528171 Aeromonas salmonicida 60.4352126607319 1011.0 observed 0 0
HV814646 Aeromonas salmonicida 50.4761904761905 315.0 observed 0 0
HV814647 Aeromonas salmonicida 50.4761904761905 315.0 observed 0 0
HW645809 Aeromonas salmonicida 50.4761904761905 315.0 observed 0 0
HW645810 Aeromonas salmonicida 50.4761904761905 315.0 observed 0 0
JC186588 Aeromonas salmonicida 50.4761904761905 315.0 observed 0 0
JC186589 Aeromonas salmonicida 50.4761904761905 315.0 observed 0 0
LQ708017 Aeromonas salmonicida 51.5186028853455 2634.0 observed 0 0
LQ708037 Aeromonas salmonicida 51.5186028853455 2634.0 observed 0 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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