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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

18 rows where Is_protein_coding_sequence = 0 and Species_name = "Bythograea thermydron"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
CQ871119 Bythograea thermydron 54.7140649149923 1294.0 observed 0 0
CQ871120 Bythograea thermydron 55.5984555984556 1295.0 observed 0 0
CQ871129 Bythograea thermydron 55.0561797752809 178.0 observed 0 0
CQ871130 Bythograea thermydron 39.1304347826087 69.0 observed 0 0
CQ871132 Bythograea thermydron 42.0289855072464 69.0 observed 0 0
CQ871144 Bythograea thermydron 44.4444444444444 36.0 observed 0 0
CQ871145 Bythograea thermydron 45.9459459459459 37.0 observed 0 0
CQ871146 Bythograea thermydron 57.7464788732394 142.0 observed 0 0
CQ871147 Bythograea thermydron 31.25 32.0 observed 0 0
CQ871148 Bythograea thermydron 44.4444444444444 36.0 observed 0 0
CQ871149 Bythograea thermydron 48.6486486486486 37.0 observed 0 0
CQ871150 Bythograea thermydron 58.7412587412587 143.0 observed 0 0
CQ871151 Bythograea thermydron 34.375 32.0 observed 0 0
CQ871164 Bythograea thermydron 52.0 25.0 observed 0 0
CQ871165 Bythograea thermydron 52.0 25.0 observed 0 0
CQ871166 Bythograea thermydron 52.0 25.0 observed 0 0
CQ871167 Bythograea thermydron 52.0 25.0 observed 0 0
CQ871168 Bythograea thermydron 56.0 25.0 observed 0 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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