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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

16 rows where Is_protein_coding_sequence = 0 and Species_name = "Conus betulinus"

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These facets timed out: Sequence_status, Is_annotated, Species_name

Is_protein_coding_sequence 1

  • - · 16 ✖
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
BD261419 Conus betulinus 56.5022421524664 223.0 observed 0 0
BD261421 Conus betulinus 54.7085201793722 223.0 observed 0 0
BD261460 Conus betulinus 52.5974025974026 154.0 observed 0 0
BD261480 Conus betulinus 59.2356687898089 157.0 observed 0 0
BD261481 Conus betulinus 56.2913907284768 151.0 observed 0 0
BD394974 Conus betulinus 49.5192307692308 208.0 observed 0 0
DD101310 Conus betulinus 47.9865771812081 298.0 observed 0 0
DD101311 Conus betulinus 50.0 298.0 observed 0 0
DD101312 Conus betulinus 47.5177304964539 282.0 observed 0 0
DD101388 Conus betulinus 51.0460251046025 239.0 observed 0 0
DD101389 Conus betulinus 51.7699115044248 226.0 observed 0 0
FB299936 Conus betulinus 56.5022421524664 223.0 observed 0 0
FB299940 Conus betulinus 54.7085201793722 223.0 observed 0 0
FB300097 Conus betulinus 52.5974025974026 154.0 observed 0 0
FB300137 Conus betulinus 59.2356687898089 157.0 observed 0 0
FB300139 Conus betulinus 56.2913907284768 151.0 observed 0 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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