home / MABPAT_dataset

Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

51 rows where Is_protein_coding_sequence = 0 and Species_name = "Megathura crenulata"

✎ View and edit SQL

This data as json, CSV (advanced)

Species_name 1

  • Megathura crenulata · 51 ✖

Sequence_status 1

  • observed 51

Is_protein_coding_sequence 1

  • - · 51 ✖

Is_annotated 1

  • 0 51
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
AX035848 Megathura crenulata 43.3977455716586 1242.0 observed 0 0
AX035849 Megathura crenulata 44.7411003236246 1236.0 observed 0 0
AX035850 Megathura crenulata 50.6224066390041 241.0 observed 0 0
AX035852 Megathura crenulata 46.7105263157895 760.0 observed 0 0
AX035853 Megathura crenulata 47.0588235294118 323.0 observed 0 0
AX035885 Megathura crenulata 45.4256165473349 1257.0 observed 0 0
AX035886 Megathura crenulata 45.8532695374801 1254.0 observed 0 0
AX035887 Megathura crenulata 49.1159135559921 509.0 observed 0 0
AX035889 Megathura crenulata 44.5512820512821 1248.0 observed 0 0
AX035890 Megathura crenulata 43.6754176610979 1257.0 observed 0 0
AX035891 Megathura crenulata 43.3414043583535 1239.0 observed 0 0
AX088452 Megathura crenulata 43.3977455716586 1242.0 observed 0 0
AX088453 Megathura crenulata 44.7411003236246 1236.0 observed 0 0
AX088454 Megathura crenulata 50.6224066390041 241.0 observed 0 0
AX088456 Megathura crenulata 46.7105263157895 760.0 observed 0 0
AX088457 Megathura crenulata 47.0588235294118 323.0 observed 0 0
AX088489 Megathura crenulata 45.4256165473349 1257.0 observed 0 0
AX088490 Megathura crenulata 45.8532695374801 1254.0 observed 0 0
AX088491 Megathura crenulata 49.1159135559921 509.0 observed 0 0
AX088493 Megathura crenulata 44.5512820512821 1248.0 observed 0 0
AX088494 Megathura crenulata 43.6754176610979 1257.0 observed 0 0
AX088495 Megathura crenulata 43.3414043583535 1239.0 observed 0 0
AX088574 Megathura crenulata 35.5126300148588 673.0 observed 0 0
AX088575 Megathura crenulata 34.7985347985348 273.0 observed 0 0
AX088576 Megathura crenulata 30.2904564315353 241.0 observed 0 0
AX088577 Megathura crenulata 33.9449541284404 327.0 observed 0 0
AX088578 Megathura crenulata 35.3862212943633 958.0 observed 0 0
AX088579 Megathura crenulata 38.0184331797235 868.0 observed 0 0
AX088580 Megathura crenulata 36.1834654586636 1766.0 observed 0 0
AX088581 Megathura crenulata 35.9389895138227 1049.0 observed 0 0
AX088582 Megathura crenulata 46.0455037919827 1846.0 observed 0 0
AX088583 Megathura crenulata 29.5180722891566 166.0 observed 0 0
AX088584 Megathura crenulata 36.3636363636364 726.0 observed 0 0
AX088585 Megathura crenulata 29.7650130548303 383.0 observed 0 0
AX088586 Megathura crenulata 33.6601307189542 306.0 observed 0 0
AX088587 Megathura crenulata 39.5534290271132 627.0 observed 0 0
AX088588 Megathura crenulata 34.2105263157895 266.0 observed 0 0
AX088589 Megathura crenulata 34.2105263157895 266.0 observed 0 0
AX088590 Megathura crenulata 36.8421052631579 190.0 observed 0 0
AX088646 Megathura crenulata 43.3977455716586 1242.0 observed 0 0
AX088647 Megathura crenulata 44.7411003236246 1236.0 observed 0 0
AX088648 Megathura crenulata 45.4256165473349 1257.0 observed 0 0
AX088649 Megathura crenulata 46.5968586387435 191.0 observed 0 0
AX088651 Megathura crenulata 47.4885844748858 219.0 observed 0 0
AX088653 Megathura crenulata 49.2063492063492 126.0 observed 0 0
AX088661 Megathura crenulata 44.3910256410256 1248.0 observed 0 0
AX088662 Megathura crenulata 43.6754176610979 1257.0 observed 0 0
AX088663 Megathura crenulata 43.3414043583535 1239.0 observed 0 0
AX088664 Megathura crenulata 49.2146596858639 191.0 observed 0 0
AX088666 Megathura crenulata 49.2307692307692 195.0 observed 0 0
AX088667 Megathura crenulata 52.4390243902439 164.0 observed 0 0

Advanced export

JSON shape: default, array, newline-delimited, object

CSV options:

CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
Powered by Datasette · Queries took 1559.686ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT