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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

23 rows where Is_protein_coding_sequence = 0 and Species_name = "Ostreococcus sp. 'lucimarinus'"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
FB983338 Ostreococcus sp. 'lucimarinus' 63.7382075471698 1696.0 observed 0 0
FB983340 Ostreococcus sp. 'lucimarinus' 62.9230014713095 2039.0 observed 0 0
FB983342 Ostreococcus sp. 'lucimarinus' 58.4916522740357 1737.0 observed 0 0
FB983344 Ostreococcus sp. 'lucimarinus' 59.2269326683292 1604.0 observed 0 0
FB983346 Ostreococcus sp. 'lucimarinus' 66.1297344362212 2297.0 observed 0 0
FB983348 Ostreococcus sp. 'lucimarinus' 59.0651558073654 1412.0 observed 0 0
FB983350 Ostreococcus sp. 'lucimarinus' 58.7385652383245 2077.0 observed 0 0
HC357683 Ostreococcus sp. 'lucimarinus' 60.2622576966933 1754.0 observed 0 0
HC521173 Ostreococcus sp. 'lucimarinus' 63.7382075471698 1696.0 observed 0 0
HC521175 Ostreococcus sp. 'lucimarinus' 62.9230014713095 2039.0 observed 0 0
HC521177 Ostreococcus sp. 'lucimarinus' 58.4916522740357 1737.0 observed 0 0
HC521179 Ostreococcus sp. 'lucimarinus' 59.2269326683292 1604.0 observed 0 0
HC521181 Ostreococcus sp. 'lucimarinus' 66.1297344362212 2297.0 observed 0 0
HC521183 Ostreococcus sp. 'lucimarinus' 59.0651558073654 1412.0 observed 0 0
HC521185 Ostreococcus sp. 'lucimarinus' 58.7385652383245 2077.0 observed 0 0
HC733591 Ostreococcus sp. 'lucimarinus' 63.7382075471698 1696.0 observed 0 0
HC733593 Ostreococcus sp. 'lucimarinus' 62.9230014713095 2039.0 observed 0 0
HC733595 Ostreococcus sp. 'lucimarinus' 58.4916522740357 1737.0 observed 0 0
HC733597 Ostreococcus sp. 'lucimarinus' 59.2269326683292 1604.0 observed 0 0
HC733599 Ostreococcus sp. 'lucimarinus' 66.1297344362212 2297.0 observed 0 0
HC733601 Ostreococcus sp. 'lucimarinus' 59.0651558073654 1412.0 observed 0 0
HC733603 Ostreococcus sp. 'lucimarinus' 58.7385652383245 2077.0 observed 0 0
LQ976061 Ostreococcus sp. 'lucimarinus' 60.2622576966933 1754.0 observed 0 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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