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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

63 rows where Is_protein_coding_sequence = 0 and Species_name = "Pyrococcus furiosus"

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These facets timed out: Sequence_status

Species_name 1

  • Pyrococcus furiosus · 63 ✖

Is_protein_coding_sequence 1

  • - · 63 ✖

Is_annotated 1

  • 0 63
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
AX077091 Pyrococcus furiosus 44.0 25.0 observed 0 0
AX077092 Pyrococcus furiosus 37.037037037037 27.0 observed 0 0
AX077099 Pyrococcus furiosus 56.0 25.0 observed 0 0
AX077100 Pyrococcus furiosus 37.037037037037 27.0 observed 0 0
AX077102 Pyrococcus furiosus 42.8571428571428 511.0 observed 0 0
AX077103 Pyrococcus furiosus 42.9141716566866 501.0 observed 0 0
AX077104 Pyrococcus furiosus 42.3868312757202 486.0 observed 0 0
BD012151 Pyrococcus furiosus 41.1480534242683 3519.0 observed 0 0
BD082898 Pyrococcus furiosus 40.8 1375.0 observed 0 0
BD292316 Pyrococcus furiosus 44.0 25.0 observed 0 0
BD292317 Pyrococcus furiosus 37.037037037037 27.0 observed 0 0
BD292324 Pyrococcus furiosus 56.0 25.0 observed 0 0
BD292325 Pyrococcus furiosus 37.037037037037 27.0 observed 0 0
BD292326 Pyrococcus furiosus 42.8571428571428 511.0 observed 0 0
BD292327 Pyrococcus furiosus 42.9141716566866 501.0 observed 0 0
BD292328 Pyrococcus furiosus 42.3868312757202 486.0 observed 0 0
BD421350 Pyrococcus furiosus 47.0588235294118 34.0 observed 0 0
CQ976032 Pyrococcus furiosus 41.6915422885572 1005.0 observed 0 0
DD082900 Pyrococcus furiosus 43.7389770723104 2835.0 observed 0 0
DD082905 Pyrococcus furiosus 62.9175946547884 898.0 observed 0 0
DD082906 Pyrococcus furiosus 42.392444910808 4765.0 observed 0 0
DD082907 Pyrococcus furiosus 57.9310344827586 145.0 observed 0 0
DD090562 Pyrococcus furiosus 43.2331991328585 3229.0 observed 0 0
DD090563 Pyrococcus furiosus 41.2403100775194 1290.0 observed 0 0
DD225649 Pyrococcus furiosus 40.2529761904762 1344.0 observed 0 0
DD348469 Pyrococcus furiosus 39.2112032009145 3499.0 observed 0 0
DD360341 Pyrococcus furiosus 39.2112032009145 3499.0 observed 0 0
DD432207 Pyrococcus furiosus 39.2112032009145 3499.0 observed 0 0
DD463248 Pyrococcus furiosus 48.0 25.0 observed 0 0
DD463249 Pyrococcus furiosus 45.8333333333333 24.0 observed 0 0
DD463250 Pyrococcus furiosus 55.1724137931034 29.0 observed 0 0
DD463251 Pyrococcus furiosus 43.75 32.0 observed 0 0
DD463252 Pyrococcus furiosus 36.6666666666667 30.0 observed 0 0
DD463253 Pyrococcus furiosus 36.6666666666667 30.0 observed 0 0
DD463254 Pyrococcus furiosus 33.3333333333333 30.0 observed 0 0
DD463255 Pyrococcus furiosus 33.3333333333333 30.0 observed 0 0
DD463256 Pyrococcus furiosus 33.3333333333333 30.0 observed 0 0
DJ080111 Pyrococcus furiosus 52.3809523809524 21.0 observed 0 0
DJ080113 Pyrococcus furiosus 44.0 25.0 observed 0 0
DJ080114 Pyrococcus furiosus 37.037037037037 27.0 observed 0 0
DJ328622 Pyrococcus furiosus 41.6915422885572 1005.0 observed 0 0
E10240 Pyrococcus furiosus 44.9315068493151 730.0 observed 0 0
E10242 Pyrococcus furiosus 44.6902654867257 678.0 observed 0 0
E10919 Pyrococcus furiosus 50.617746162486 5342.0 observed 0 0
E10930 Pyrococcus furiosus 35.0 20.0 observed 0 0
E10931 Pyrococcus furiosus 47.8260869565217 23.0 observed 0 0
E10932 Pyrococcus furiosus 47.8260869565217 23.0 observed 0 0
E10933 Pyrococcus furiosus 50.617746162486 5342.0 observed 0 0
FW349745 Pyrococcus furiosus 39.2872477458137 2329.0 observed 0 0
HB886171 Pyrococcus furiosus 40.8 1375.0 observed 0 0
HC943580 Pyrococcus furiosus 40.8 1375.0 observed 0 0
HH829713 Pyrococcus furiosus 39.4792064097673 10484.0 observed 0 0
HH829714 Pyrococcus furiosus 40.5523980456676 10029.0 observed 0 0
HV447664 Pyrococcus furiosus 42.392444910808 4765.0 observed 0 0
JC251177 Pyrococcus furiosus 30.0 30.0 observed 0 0
JC323727 Pyrococcus furiosus 32.1428571428571 28.0 observed 0 0
JC323728 Pyrococcus furiosus 53.5714285714286 28.0 observed 0 0
JC323729 Pyrococcus furiosus 48.7179487179487 39.0 observed 0 0
JC323730 Pyrococcus furiosus 48.7179487179487 39.0 observed 0 0
JC323731 Pyrococcus furiosus 42.2222222222222 45.0 observed 0 0
JC323732 Pyrococcus furiosus 42.2222222222222 45.0 observed 0 0
MP088885 Pyrococcus furiosus 24.1379310344828 29.0 observed 0 0
MP494194 Pyrococcus furiosus 24.1379310344828 29.0 observed 0 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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