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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

14 rows where Is_protein_coding_sequence = 1, Sequence_length = "714.0" and Species_name = "Leeuwenhoekiella nanhaiensis"

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These facets timed out: Species_name

Sequence_status 1

  • predicted 14

Is_protein_coding_sequence 1

  • 1 · 14 ✖

Is_annotated 1

  • 1 14
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
HL449473 Leeuwenhoekiella nanhaiensis 44.9579831932773 714.0 predicted 1 1
HL449474 Leeuwenhoekiella nanhaiensis 45.2380952380952 714.0 predicted 1 1
HL449475 Leeuwenhoekiella nanhaiensis 45.3781512605042 714.0 predicted 1 1
HL449476 Leeuwenhoekiella nanhaiensis 45.5182072829132 714.0 predicted 1 1
HL449477 Leeuwenhoekiella nanhaiensis 45.0980392156863 714.0 predicted 1 1
HL449478 Leeuwenhoekiella nanhaiensis 45.2380952380952 714.0 predicted 1 1
HL449479 Leeuwenhoekiella nanhaiensis 46.218487394958 714.0 predicted 1 1
HL449480 Leeuwenhoekiella nanhaiensis 45.0980392156863 714.0 predicted 1 1
LQ678976 Leeuwenhoekiella nanhaiensis 44.9579831932773 714.0 predicted 1 1
MM589956 Leeuwenhoekiella nanhaiensis 45.0980392156863 714.0 predicted 1 1
MV807650 Leeuwenhoekiella nanhaiensis 44.9579831932773 714.0 predicted 1 1
MX548656 Leeuwenhoekiella nanhaiensis 45.0980392156863 714.0 predicted 1 1
MX548657 Leeuwenhoekiella nanhaiensis 46.078431372549 714.0 predicted 1 1
MX548658 Leeuwenhoekiella nanhaiensis 45.6582633053221 714.0 predicted 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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