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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

259 rows where Is_protein_coding_sequence = 1 and Species_name = "Aequorea victoria"

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Is_annotated 2

  • 0 184
  • 1 75

Species_name 1

  • Aequorea victoria · 259 ✖

Sequence_status 1

  • observed 259

Is_protein_coding_sequence 1

  • 1 · 259 ✖
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
AX024038 Aequorea victoria 47.5598935226264 3381.0 observed 1 0
AX057689 Aequorea victoria 35.5648535564854 717.0 observed 1 0
AX207710 Aequorea victoria 61.3888888888889 720.0 observed 1 0
AX233586 Aequorea victoria 61.3888888888889 720.0 observed 1 0
AX250564 Aequorea victoria 42.3011844331641 591.0 observed 1 0
AX250565 Aequorea victoria 42.8087986463621 591.0 observed 1 0
AX250566 Aequorea victoria 42.8087986463621 591.0 observed 1 0
AX250567 Aequorea victoria 42.6807760141093 567.0 observed 1 0
AX250568 Aequorea victoria 42.687074829932 588.0 observed 1 0
AX250569 Aequorea victoria 42.687074829932 588.0 observed 1 0
AX250570 Aequorea victoria 42.687074829932 588.0 observed 1 0
AX250571 Aequorea victoria 42.3280423280423 567.0 observed 1 0
AX343037 Aequorea victoria 61.1111111111111 720.0 observed 1 1
AX343039 Aequorea victoria 61.1111111111111 720.0 observed 1 1
AX343041 Aequorea victoria 39.0516039051604 717.0 observed 1 1
AX343043 Aequorea victoria 38.9121338912134 717.0 observed 1 1
AX348235 Aequorea victoria 61.2903225806452 2666.0 observed 1 0
AX348237 Aequorea victoria 58.5428424833248 1949.0 observed 1 0
AX348239 Aequorea victoria 40.1850462615654 3999.0 observed 1 1
AX357510 Aequorea victoria 38.1284916201117 716.0 observed 1 1
AX361574 Aequorea victoria 61.5277777777778 720.0 observed 1 0
AX361576 Aequorea victoria 38.4937238493724 717.0 observed 1 0
AX418345 Aequorea victoria 54.6202768424991 2673.0 observed 1 0
AX418346 Aequorea victoria 54.8888888888889 1350.0 observed 1 0
AX418347 Aequorea victoria 55.9116809116809 1404.0 observed 1 0
AX418348 Aequorea victoria 56.3941299790356 1431.0 observed 1 0
AX418349 Aequorea victoria 53.5320088300221 2718.0 observed 1 0
AX441270 Aequorea victoria 61.5062761506276 717.0 observed 1 1
AX590396 Aequorea victoria 38.7726638772664 717.0 observed 1 0
AX592965 Aequorea victoria 38.7726638772664 717.0 observed 1 0
AX701618 Aequorea victoria 42.4561403508772 570.0 observed 1 0
AX702103 Aequorea victoria 42.1666666666667 600.0 observed 1 0
AX743217 Aequorea victoria 38.7726638772664 717.0 observed 1 0
AX781300 Aequorea victoria 58.5399449035813 1452.0 observed 1 0
AX781302 Aequorea victoria 54.9232158988257 1107.0 observed 1 0
AX781304 Aequorea victoria 58.6996336996337 1092.0 observed 1 0
AX781306 Aequorea victoria 52.5537634408602 744.0 observed 1 0
AX781308 Aequorea victoria 54.2185338865837 723.0 observed 1 0
AX781310 Aequorea victoria 50.1291989664083 387.0 observed 1 0
AX815521 Aequorea victoria 61.5277777777778 720.0 observed 1 0
AX815523 Aequorea victoria 61.6666666666667 720.0 observed 1 1
AX815525 Aequorea victoria 61.9444444444444 720.0 observed 1 0
AX815527 Aequorea victoria 61.5277777777778 720.0 observed 1 0
AX815534 Aequorea victoria 61.5277777777778 720.0 observed 1 0
AX815535 Aequorea victoria 61.5277777777778 720.0 observed 1 0
AX815536 Aequorea victoria 61.5277777777778 720.0 observed 1 0
BD136947 Aequorea victoria 61.5277777777778 720.0 observed 1 0
BD136948 Aequorea victoria 38.4937238493724 717.0 observed 1 0
BD136949 Aequorea victoria 62.2222222222222 720.0 observed 1 1
BD136953 Aequorea victoria 61.5277777777778 720.0 observed 1 0
BD136954 Aequorea victoria 38.4937238493724 717.0 observed 1 0
BD160955 Aequorea victoria 61.5062761506276 717.0 observed 1 0
BD228335 Aequorea victoria 47.3713646532438 1788.0 observed 1 0
BD228336 Aequorea victoria 48.0916030534351 2751.0 observed 1 0
BD228337 Aequorea victoria 60.337552742616 1896.0 observed 1 0
BD228338 Aequorea victoria 50.3703703703704 2160.0 observed 1 0
BD228339 Aequorea victoria 50.7649513212796 2157.0 observed 1 0
BD228340 Aequorea victoria 62.7882599580713 1908.0 observed 1 0
BD228341 Aequorea victoria 61.2781954887218 2394.0 observed 1 0
BD228342 Aequorea victoria 61.3199665831245 2394.0 observed 1 0
BD228343 Aequorea victoria 54.0805223068553 2757.0 observed 1 0
BD270673 Aequorea victoria 38.3542538354254 717.0 observed 1 1
BD374385 Aequorea victoria 61.3888888888889 720.0 observed 1 0
BD393864 Aequorea victoria 42.3011844331641 591.0 observed 1 0
BD393869 Aequorea victoria 42.687074829932 588.0 observed 1 0
BD393870 Aequorea victoria 42.687074829932 588.0 observed 1 0
BD393871 Aequorea victoria 42.3280423280423 567.0 observed 1 0
BD394893 Aequorea victoria 47.5598935226264 3381.0 observed 1 0
CQ812176 Aequorea victoria 61.4035087719298 798.0 observed 1 0
CQ818353 Aequorea victoria 61.4035087719298 798.0 observed 1 0
CQ896997 Aequorea victoria 61.5277777777778 720.0 observed 1 1
CQ896999 Aequorea victoria 60.02331002331 858.0 observed 1 0
CQ897001 Aequorea victoria 60.4018912529551 846.0 observed 1 0
CQ897008 Aequorea victoria 38.9355742296919 714.0 observed 1 1
CQ897010 Aequorea victoria 61.5277777777778 720.0 observed 1 0
CS131444 Aequorea victoria 39.2318244170096 729.0 observed 1 1
CS131445 Aequorea victoria 39.3305439330544 717.0 observed 1 1
CS131446 Aequorea victoria 39.7489539748954 717.0 observed 1 1
CS131447 Aequorea victoria 38.7726638772664 717.0 observed 1 1
CS131448 Aequorea victoria 38.9121338912134 717.0 observed 1 1
CS131449 Aequorea victoria 39.0516039051604 717.0 observed 1 1
CS131450 Aequorea victoria 39.0516039051604 717.0 observed 1 1
CS131451 Aequorea victoria 38.9121338912134 717.0 observed 1 1
CS131452 Aequorea victoria 39.3305439330544 717.0 observed 1 1
CS131453 Aequorea victoria 39.4700139470014 717.0 observed 1 1
CS131454 Aequorea victoria 39.6094839609484 717.0 observed 1 1
CS131455 Aequorea victoria 39.3305439330544 717.0 observed 1 1
CS131456 Aequorea victoria 39.4700139470014 717.0 observed 1 1
CS131457 Aequorea victoria 38.6331938633194 717.0 observed 1 1
CS131458 Aequorea victoria 39.6094839609484 717.0 observed 1 1
CS131459 Aequorea victoria 39.1910739191074 717.0 observed 1 1
CS131461 Aequorea victoria 39.4700139470014 717.0 observed 1 0
CS131463 Aequorea victoria 38.9121338912134 717.0 observed 1 1
CS178201 Aequorea victoria 42.12271973466 603.0 observed 1 0
CS244634 Aequorea victoria 35.5648535564854 717.0 observed 1 1
CS259341 Aequorea victoria 41.0041841004184 717.0 observed 1 1
CS476008 Aequorea victoria 39.4957983193277 714.0 observed 1 0
CS499892 Aequorea victoria 61.5277777777778 720.0 observed 1 0
CS499896 Aequorea victoria 61.0817941952507 758.0 observed 1 0
CS569007 Aequorea victoria 38.4937238493724 717.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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