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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

67 rows where Is_protein_coding_sequence = 1 and Species_name = "Arenicola marina"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
CS080218 Arenicola marina 59.704641350211 474.0 observed 1 0
CS080220 Arenicola marina 58.2809224318658 477.0 observed 1 0
CS080222 Arenicola marina 59.4936708860759 474.0 observed 1 0
CS080224 Arenicola marina 59.6385542168675 498.0 observed 1 0
CS080226 Arenicola marina 58.6345381526104 498.0 observed 1 0
CS080228 Arenicola marina 58.7548638132296 771.0 observed 1 0
CS080230 Arenicola marina 59.3085106382979 376.0 observed 1 0
CS080232 Arenicola marina 59.375 288.0 observed 1 0
CS080234 Arenicola marina 60.2777777777778 360.0 observed 1 0
CS080236 Arenicola marina 59.4871794871795 390.0 observed 1 0
CS419159 Arenicola marina 51.1784511784512 297.0 observed 1 0
CS419161 Arenicola marina 51.8518518518519 297.0 observed 1 0
CS419163 Arenicola marina 51.5151515151515 297.0 observed 1 0
CS419165 Arenicola marina 52.5252525252525 297.0 observed 1 0
CS419167 Arenicola marina 52.8619528619529 297.0 observed 1 0
CS419169 Arenicola marina 54.1176470588235 255.0 observed 1 0
CS419171 Arenicola marina 54.9019607843137 255.0 observed 1 0
CS419173 Arenicola marina 52.9411764705882 255.0 observed 1 0
CS419175 Arenicola marina 53.7254901960784 255.0 observed 1 0
CS419177 Arenicola marina 52.5490196078431 255.0 observed 1 0
CS419179 Arenicola marina 53.968253968254 252.0 observed 1 0
CS419181 Arenicola marina 53.5353535353535 297.0 observed 1 0
CS419183 Arenicola marina 52.7777777777778 252.0 observed 1 0
CS419185 Arenicola marina 51.7133956386293 321.0 observed 1 0
CS560528 Arenicola marina 53.405017921147 558.0 observed 1 0
DJ049521 Arenicola marina 59.704641350211 474.0 observed 1 0
DJ049522 Arenicola marina 58.2809224318658 477.0 observed 1 0
DJ049523 Arenicola marina 59.4936708860759 474.0 observed 1 0
DJ049524 Arenicola marina 59.6385542168675 498.0 observed 1 0
DJ049525 Arenicola marina 58.6345381526104 498.0 observed 1 0
DJ049526 Arenicola marina 58.7548638132296 771.0 observed 1 0
DJ049527 Arenicola marina 59.3085106382979 376.0 observed 1 0
DJ049528 Arenicola marina 59.375 288.0 observed 1 0
DJ049529 Arenicola marina 60.2777777777778 360.0 observed 1 0
DJ049530 Arenicola marina 59.4871794871795 390.0 observed 1 0
DM077720 Arenicola marina 51.1784511784512 297.0 observed 1 0
DM077721 Arenicola marina 51.8518518518519 297.0 observed 1 0
DM077722 Arenicola marina 51.5151515151515 297.0 observed 1 0
DM077723 Arenicola marina 52.5252525252525 297.0 observed 1 0
DM077724 Arenicola marina 52.8619528619529 297.0 observed 1 0
DM077725 Arenicola marina 54.1176470588235 255.0 observed 1 0
DM077726 Arenicola marina 54.9019607843137 255.0 observed 1 0
DM077727 Arenicola marina 52.9411764705882 255.0 observed 1 0
DM077728 Arenicola marina 53.7254901960784 255.0 observed 1 0
DM077729 Arenicola marina 52.5490196078431 255.0 observed 1 0
DM077730 Arenicola marina 53.968253968254 252.0 observed 1 0
DM077731 Arenicola marina 53.5353535353535 297.0 observed 1 0
DM077732 Arenicola marina 52.7777777777778 252.0 observed 1 0
DM077733 Arenicola marina 51.7133956386293 321.0 observed 1 0
DM165963 Arenicola marina 53.405017921147 558.0 observed 1 0
GN110377 Arenicola marina 51.9668737060041 483.0 observed 1 0
HC507507 Arenicola marina 51.9668737060041 483.0 observed 1 0
HW368143 Arenicola marina 51.1784511784512 297.0 observed 1 0
HW368144 Arenicola marina 51.8518518518519 297.0 observed 1 0
HW368145 Arenicola marina 51.5151515151515 297.0 observed 1 0
HW368146 Arenicola marina 52.5252525252525 297.0 observed 1 0
HW368147 Arenicola marina 52.8619528619529 297.0 observed 1 0
HW368148 Arenicola marina 54.1176470588235 255.0 observed 1 0
HW368149 Arenicola marina 54.9019607843137 255.0 observed 1 0
HW368150 Arenicola marina 52.9411764705882 255.0 observed 1 0
HW368151 Arenicola marina 53.7254901960784 255.0 observed 1 0
HW368152 Arenicola marina 52.5490196078431 255.0 observed 1 0
HW368153 Arenicola marina 53.968253968254 252.0 observed 1 0
HW368154 Arenicola marina 53.5353535353535 297.0 observed 1 0
HW368155 Arenicola marina 52.7777777777778 252.0 observed 1 0
HW368156 Arenicola marina 51.7133956386293 321.0 observed 1 0
HW586837 Arenicola marina 53.405017921147 558.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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