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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

29 rows where Is_protein_coding_sequence = 1 and Species_name = "Kordia algicida"

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These facets timed out: Sequence_status, Is_protein_coding_sequence

Is_annotated 2

  • 0 27
  • 1 2

Species_name 1

  • Kordia algicida · 29 ✖
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
DI345416 Kordia algicida 41.0119047619048 1680.0 observed 1 0
DI394108 Kordia algicida 37.5429553264605 1164.0 observed 1 0
DI394125 Kordia algicida 37.5429553264605 1164.0 observed 1 0
HC507955 Kordia algicida 41.0119047619048 1680.0 observed 1 0
HC508867 Kordia algicida 41.0119047619048 1680.0 observed 1 0
HC509566 Kordia algicida 41.0119047619048 1680.0 observed 1 0
HV700118 Kordia algicida 41.0119047619048 1680.0 observed 1 1
HW262730 Kordia algicida 37.5429553264605 1164.0 observed 1 1
HW268007 Kordia algicida 41.0119047619048 1680.0 observed 1 0
HW581730 Kordia algicida 37.5429553264605 1164.0 observed 1 0
JC065811 Kordia algicida 37.5429553264605 1164.0 observed 1 0
JC066103 Kordia algicida 37.5429553264605 1164.0 observed 1 0
JC066230 Kordia algicida 37.5429553264605 1164.0 observed 1 0
JC066324 Kordia algicida 37.5429553264605 1164.0 observed 1 0
JC066430 Kordia algicida 37.5429553264605 1164.0 observed 1 0
JC181679 Kordia algicida 37.5429553264605 1164.0 observed 1 0
JC183263 Kordia algicida 37.5429553264605 1164.0 observed 1 0
JC304721 Kordia algicida 37.5429553264605 1164.0 observed 1 0
JC738320 Kordia algicida 41.0119047619048 1680.0 observed 1 0
LF387423 Kordia algicida 37.5429553264605 1164.0 observed 1 0
LF401327 Kordia algicida 37.5429553264605 1164.0 observed 1 0
LF401463 Kordia algicida 37.5429553264605 1164.0 observed 1 0
LF709805 Kordia algicida 41.0119047619048 1680.0 observed 1 0
LQ106954 Kordia algicida 37.5429553264605 1164.0 observed 1 0
LQ309260 Kordia algicida 37.5429553264605 1164.0 observed 1 0
LQ310251 Kordia algicida 37.5429553264605 1164.0 observed 1 0
LQ310415 Kordia algicida 37.5429553264605 1164.0 observed 1 0
LY299003 Kordia algicida 37.5429553264605 1164.0 observed 1 0
LZ101022 Kordia algicida 37.5429553264605 1164.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
Powered by Datasette · Queries took 3517.965ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT