Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
7 rows where Is_protein_coding_sequence = 1 and Species_name = "Planococcus antarcticus dsm 14505"
This data as json, CSV (advanced)
These facets timed out: Sequence_status, Is_annotated, Species_name
Is_protein_coding_sequence 1
- 1 · 7 ✖
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| LY767040 | Planococcus antarcticus dsm 14505 | 61.9690154922539 | 4002.0 | predicted | 1 | 1 |
| LY768200 | Planococcus antarcticus dsm 14505 | 46.9265367316342 | 4002.0 | predicted | 1 | 1 |
| LY769360 | Planococcus antarcticus dsm 14505 | 49.800099950025 | 4002.0 | predicted | 1 | 1 |
| LY770520 | Planococcus antarcticus dsm 14505 | 36.6566716641679 | 4002.0 | predicted | 1 | 1 |
| LY771680 | Planococcus antarcticus dsm 14505 | 47.9260369815092 | 4002.0 | predicted | 1 | 1 |
| LY772840 | Planococcus antarcticus dsm 14505 | 60.2698650674663 | 4002.0 | predicted | 1 | 1 |
| LY774000 | Planococcus antarcticus dsm 14505 | 36.5817091454273 | 4002.0 | predicted | 1 | 1 |
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CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);