Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
20 rows where Is_protein_coding_sequence = 1 and Species_name = "Sulfitobacter pontiacus"
This data as json, CSV (advanced)
These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| HJ398052 | Sulfitobacter pontiacus | 58.0481622306717 | 789.0 | predicted | 1 | 1 |
| HK081483 | Sulfitobacter pontiacus | 57.1428571428571 | 777.0 | predicted | 1 | 1 |
| HK082540 | Sulfitobacter pontiacus | 62.6160337552743 | 1185.0 | predicted | 1 | 1 |
| HK082739 | Sulfitobacter pontiacus | 57.5757575757576 | 1221.0 | predicted | 1 | 1 |
| HK083283 | Sulfitobacter pontiacus | 57.6969696969697 | 825.0 | predicted | 1 | 1 |
| HK083285 | Sulfitobacter pontiacus | 59.8717948717949 | 780.0 | predicted | 1 | 1 |
| HK083579 | Sulfitobacter pontiacus | 65.6113537117904 | 2748.0 | predicted | 1 | 1 |
| HK128743 | Sulfitobacter pontiacus | 61.2903225806452 | 1767.0 | predicted | 1 | 1 |
| HK287044 | Sulfitobacter pontiacus | 63.6936936936937 | 1110.0 | predicted | 1 | 1 |
| HK287648 | Sulfitobacter pontiacus | 57.7235772357724 | 246.0 | predicted | 1 | 1 |
| HK288694 | Sulfitobacter pontiacus | 62.010582010582 | 945.0 | predicted | 1 | 1 |
| HK289454 | Sulfitobacter pontiacus | 59.3544137022398 | 1518.0 | predicted | 1 | 1 |
| HK291829 | Sulfitobacter pontiacus | 61.9631901840491 | 489.0 | predicted | 1 | 1 |
| HK455668 | Sulfitobacter pontiacus | 58.6608442503639 | 687.0 | predicted | 1 | 1 |
| HK456592 | Sulfitobacter pontiacus | 64.8616125150421 | 831.0 | predicted | 1 | 1 |
| LY613226 | Sulfitobacter pontiacus | 61.0535405872194 | 1158.0 | predicted | 1 | 1 |
| LY613227 | Sulfitobacter pontiacus | 62.6073380171741 | 1281.0 | predicted | 1 | 1 |
| LY613241 | Sulfitobacter pontiacus | 60.2763385146805 | 1158.0 | predicted | 1 | 1 |
| LY613242 | Sulfitobacter pontiacus | 62.4512099921936 | 1281.0 | predicted | 1 | 1 |
| LY613444 | Sulfitobacter pontiacus | 58.2089552238806 | 1005.0 | predicted | 1 | 1 |
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CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);