Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
12 rows where Sequence_length = "384.0" and Species_name = "Physeter macrocephalus"
This data as json, CSV (advanced)
Species_name 1
- Physeter macrocephalus · 12 ✖
Sequence_status 1
- predicted 12
Is_protein_coding_sequence 1
- 1 12
Is_annotated 1
- 1 12
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| GV376482 | Physeter macrocephalus | 48.9583333333333 | 384.0 | predicted | 1 | 1 |
| HK462996 | Physeter macrocephalus | 46.6145833333333 | 384.0 | predicted | 1 | 1 |
| HL238696 | Physeter macrocephalus | 65.625 | 384.0 | predicted | 1 | 1 |
| HL243183 | Physeter macrocephalus | 52.8645833333333 | 384.0 | predicted | 1 | 1 |
| HL247670 | Physeter macrocephalus | 61.4583333333333 | 384.0 | predicted | 1 | 1 |
| HL252157 | Physeter macrocephalus | 54.4270833333333 | 384.0 | predicted | 1 | 1 |
| HL256644 | Physeter macrocephalus | 52.6041666666667 | 384.0 | predicted | 1 | 1 |
| HZ198203 | Physeter macrocephalus | 58.8541666666667 | 384.0 | predicted | 1 | 1 |
| HZ202719 | Physeter macrocephalus | 47.1354166666667 | 384.0 | predicted | 1 | 1 |
| HZ207235 | Physeter macrocephalus | 59.1145833333333 | 384.0 | predicted | 1 | 1 |
| HZ211751 | Physeter macrocephalus | 51.0416666666667 | 384.0 | predicted | 1 | 1 |
| HZ216267 | Physeter macrocephalus | 48.6979166666667 | 384.0 | predicted | 1 | 1 |
Advanced export
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CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);