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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

28 rows where Sequence_length = "714.0" and Species_name = "Trichechus manatus latirostris"

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Suggested facets: GC_content

Species_name 1

  • Trichechus manatus latirostris · 28 ✖

Sequence_status 1

  • predicted 28

Is_protein_coding_sequence 1

  • 1 28

Is_annotated 1

  • 1 28
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
HL650848 Trichechus manatus latirostris 65.546218487395 714.0 predicted 1 1
HL659612 Trichechus manatus latirostris 55.4621848739496 714.0 predicted 1 1
HL668376 Trichechus manatus latirostris 64.1456582633053 714.0 predicted 1 1
HL677140 Trichechus manatus latirostris 53.921568627451 714.0 predicted 1 1
HL685904 Trichechus manatus latirostris 52.9411764705882 714.0 predicted 1 1
HZ283594 Trichechus manatus latirostris 62.4649859943978 714.0 predicted 1 1
HZ288671 Trichechus manatus latirostris 62.6050420168067 714.0 predicted 1 1
HZ291582 Trichechus manatus latirostris 49.859943977591 714.0 predicted 1 1
HZ296659 Trichechus manatus latirostris 50.5602240896359 714.0 predicted 1 1
HZ299570 Trichechus manatus latirostris 58.9635854341737 714.0 predicted 1 1
HZ304647 Trichechus manatus latirostris 61.3445378151261 714.0 predicted 1 1
HZ307558 Trichechus manatus latirostris 50.8403361344538 714.0 predicted 1 1
HZ312635 Trichechus manatus latirostris 54.6218487394958 714.0 predicted 1 1
HZ315546 Trichechus manatus latirostris 48.5994397759104 714.0 predicted 1 1
HZ320623 Trichechus manatus latirostris 49.1596638655462 714.0 predicted 1 1
LF466232 Trichechus manatus latirostris 59.9439775910364 714.0 predicted 1 1
LF501630 Trichechus manatus latirostris 46.7787114845938 714.0 predicted 1 1
LF501631 Trichechus manatus latirostris 48.3193277310924 714.0 predicted 1 1
LF537028 Trichechus manatus latirostris 57.563025210084 714.0 predicted 1 1
LF572426 Trichechus manatus latirostris 47.0588235294118 714.0 predicted 1 1
LF572427 Trichechus manatus latirostris 47.0588235294118 714.0 predicted 1 1
LF607824 Trichechus manatus latirostris 48.3193277310924 714.0 predicted 1 1
LF607825 Trichechus manatus latirostris 46.7787114845938 714.0 predicted 1 1
MY239576 Trichechus manatus latirostris 59.8039215686275 714.0 predicted 1 1
MY252633 Trichechus manatus latirostris 63.3053221288515 714.0 predicted 1 1
MY265690 Trichechus manatus latirostris 63.3053221288515 714.0 predicted 1 1
MY278747 Trichechus manatus latirostris 48.1792717086835 714.0 predicted 1 1
MY291804 Trichechus manatus latirostris 51.4005602240896 714.0 predicted 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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