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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

48 rows where Sequence_length = "828.0" and Species_name = "Trichechus manatus latirostris"

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Species_name 1

  • Trichechus manatus latirostris · 48 ✖

Sequence_status 1

  • predicted 48

Is_protein_coding_sequence 1

  • 1 48

Is_annotated 1

  • 1 48
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
HL646196 Trichechus manatus latirostris 59.2995169082126 828.0 predicted 1 1
HL654960 Trichechus manatus latirostris 48.3091787439614 828.0 predicted 1 1
HL663724 Trichechus manatus latirostris 58.2125603864734 828.0 predicted 1 1
HL672488 Trichechus manatus latirostris 49.5169082125604 828.0 predicted 1 1
HL681252 Trichechus manatus latirostris 47.463768115942 828.0 predicted 1 1
HZ282510 Trichechus manatus latirostris 60.5072463768116 828.0 predicted 1 1
HZ286785 Trichechus manatus latirostris 61.1111111111111 828.0 predicted 1 1
HZ290498 Trichechus manatus latirostris 48.1884057971015 828.0 predicted 1 1
HZ290501 Trichechus manatus latirostris 47.2222222222222 828.0 predicted 1 1
HZ294773 Trichechus manatus latirostris 49.0338164251208 828.0 predicted 1 1
HZ298486 Trichechus manatus latirostris 57.487922705314 828.0 predicted 1 1
HZ302761 Trichechus manatus latirostris 58.0917874396135 828.0 predicted 1 1
HZ306474 Trichechus manatus latirostris 50.9661835748792 828.0 predicted 1 1
HZ306477 Trichechus manatus latirostris 48.9130434782609 828.0 predicted 1 1
HZ310749 Trichechus manatus latirostris 50.7246376811594 828.0 predicted 1 1
HZ314462 Trichechus manatus latirostris 49.6376811594203 828.0 predicted 1 1
HZ314465 Trichechus manatus latirostris 48.4299516908213 828.0 predicted 1 1
HZ318737 Trichechus manatus latirostris 48.0676328502415 828.0 predicted 1 1
LF445176 Trichechus manatus latirostris 61.1111111111111 828.0 predicted 1 1
LF480574 Trichechus manatus latirostris 50.1207729468599 828.0 predicted 1 1
LF480575 Trichechus manatus latirostris 51.4492753623188 828.0 predicted 1 1
LF515972 Trichechus manatus latirostris 58.9371980676328 828.0 predicted 1 1
LF551370 Trichechus manatus latirostris 50.6038647342995 828.0 predicted 1 1
LF551371 Trichechus manatus latirostris 50.0 828.0 predicted 1 1
LF586768 Trichechus manatus latirostris 49.3961352657005 828.0 predicted 1 1
LF586769 Trichechus manatus latirostris 47.463768115942 828.0 predicted 1 1
LP847441 Trichechus manatus latirostris 39.0096618357488 828.0 predicted 1 1
MY231215 Trichechus manatus latirostris 60.3864734299517 828.0 predicted 1 1
MY231835 Trichechus manatus latirostris 60.9903381642512 828.0 predicted 1 1
MY239044 Trichechus manatus latirostris 60.9903381642512 828.0 predicted 1 1
MY241830 Trichechus manatus latirostris 64.975845410628 828.0 predicted 1 1
MY244272 Trichechus manatus latirostris 63.1642512077295 828.0 predicted 1 1
MY244892 Trichechus manatus latirostris 64.4927536231884 828.0 predicted 1 1
MY252101 Trichechus manatus latirostris 65.2173913043478 828.0 predicted 1 1
MY254887 Trichechus manatus latirostris 68.9613526570048 828.0 predicted 1 1
MY257329 Trichechus manatus latirostris 63.1642512077295 828.0 predicted 1 1
MY257949 Trichechus manatus latirostris 64.4927536231884 828.0 predicted 1 1
MY265158 Trichechus manatus latirostris 65.2173913043478 828.0 predicted 1 1
MY267944 Trichechus manatus latirostris 68.9613526570048 828.0 predicted 1 1
MY270386 Trichechus manatus latirostris 48.3091787439614 828.0 predicted 1 1
MY271006 Trichechus manatus latirostris 49.3961352657005 828.0 predicted 1 1
MY278215 Trichechus manatus latirostris 49.3961352657005 828.0 predicted 1 1
MY281001 Trichechus manatus latirostris 53.1400966183575 828.0 predicted 1 1
MY283443 Trichechus manatus latirostris 51.207729468599 828.0 predicted 1 1
MY284063 Trichechus manatus latirostris 53.1400966183575 828.0 predicted 1 1
MY291272 Trichechus manatus latirostris 52.536231884058 828.0 predicted 1 1
MY294058 Trichechus manatus latirostris 56.7632850241546 828.0 predicted 1 1
MY492159 Trichechus manatus latirostris 57.1256038647343 828.0 predicted 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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