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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

306 rows where Sequence_status = "observed" and Species_name = "Crocosphaera watsonii wh 8501"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
CS302410 Crocosphaera watsonii wh 8501 33.3333333333333 987.0 observed 1 1
FB335244 Crocosphaera watsonii wh 8501 43.1924882629108 852.0 observed 1 1
FB783895 Crocosphaera watsonii wh 8501 44.2379182156134 1614.0 observed 1 1
FB784921 Crocosphaera watsonii wh 8501 42.5387596899225 1032.0 observed 1 1
FB785377 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 1
FB791445 Crocosphaera watsonii wh 8501 44.2379182156134 1614.0 observed 1 0
FB792029 Crocosphaera watsonii wh 8501 41.8779342723005 1065.0 observed 1 1
FB793254 Crocosphaera watsonii wh 8501 37.979797979798 495.0 observed 1 1
FB795124 Crocosphaera watsonii wh 8501 42.5387596899225 1032.0 observed 1 0
FB795732 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
FB800173 Crocosphaera watsonii wh 8501 41.8779342723005 1065.0 observed 1 0
FB808019 Crocosphaera watsonii wh 8501 46.9043151969981 1599.0 observed 1 1
FB812979 Crocosphaera watsonii wh 8501 41.8779342723005 1065.0 observed 1 0
FB817469 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
FB828493 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
FB832210 Crocosphaera watsonii wh 8501 40.1709401709402 1521.0 observed 1 1
FB834183 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
FB834360 Crocosphaera watsonii wh 8501 44.0 375.0 observed 1 1
FB836475 Crocosphaera watsonii wh 8501 42.5387596899225 1032.0 observed 1 0
FB837326 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
FB841920 Crocosphaera watsonii wh 8501 37.979797979798 495.0 observed 1 0
FB845162 Crocosphaera watsonii wh 8501 41.738299904489 1047.0 observed 1 1
FB848001 Crocosphaera watsonii wh 8501 43.6412315930388 1494.0 observed 1 1
FB851646 Crocosphaera watsonii wh 8501 41.8779342723005 1065.0 observed 1 0
FB853359 Crocosphaera watsonii wh 8501 40.1709401709402 1521.0 observed 1 0
FB853568 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
FB859137 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
FB868325 Crocosphaera watsonii wh 8501 41.8779342723005 1065.0 observed 1 0
FB869300 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
FB878950 Crocosphaera watsonii wh 8501 42.5387596899225 1032.0 observed 1 0
FB879815 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
FB887415 Crocosphaera watsonii wh 8501 41.8779342723005 1065.0 observed 1 0
FB888419 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
GM956808 Crocosphaera watsonii wh 8501 36.3453815261044 498.0 observed 1 1
GM957029 Crocosphaera watsonii wh 8501 42.0581655480984 894.0 observed 1 1
GM959764 Crocosphaera watsonii wh 8501 37.3333333333333 2175.0 observed 1 1
GN095661 Crocosphaera watsonii wh 8501 35.5795148247978 1113.0 observed 1 1
GN095988 Crocosphaera watsonii wh 8501 41.5468856947296 1461.0 observed 1 1
GN098085 Crocosphaera watsonii wh 8501 43.1710615280595 2958.0 observed 1 1
GN098902 Crocosphaera watsonii wh 8501 39.9296394019349 1137.0 observed 1 1
GN105549 Crocosphaera watsonii wh 8501 44.1535776614311 573.0 observed 1 1
GN106485 Crocosphaera watsonii wh 8501 37.1868978805395 519.0 observed 1 1
GN108728 Crocosphaera watsonii wh 8501 42.5044091710758 567.0 observed 1 1
GN109195 Crocosphaera watsonii wh 8501 34.9419124218052 1119.0 observed 1 1
GN109878 Crocosphaera watsonii wh 8501 37.4617737003058 654.0 observed 1 1
GN117434 Crocosphaera watsonii wh 8501 44.1176470588235 1122.0 observed 1 1
GN120067 Crocosphaera watsonii wh 8501 44.6575342465754 1095.0 observed 1 1
GN120949 Crocosphaera watsonii wh 8501 44.8160535117057 1794.0 observed 1 1
GN122413 Crocosphaera watsonii wh 8501 44.9709060681629 1203.0 observed 1 1
GN123026 Crocosphaera watsonii wh 8501 41.2755716004813 831.0 observed 1 1
GN124741 Crocosphaera watsonii wh 8501 39.0151515151515 792.0 observed 1 1
GN125144 Crocosphaera watsonii wh 8501 43.6 750.0 observed 1 1
GN126109 Crocosphaera watsonii wh 8501 29.4871794871795 1326.0 observed 1 1
GN126306 Crocosphaera watsonii wh 8501 44.6749654218534 723.0 observed 1 1
GN126503 Crocosphaera watsonii wh 8501 36.1252115059222 1182.0 observed 1 1
GN126505 Crocosphaera watsonii wh 8501 39.6993810786914 1131.0 observed 1 1
GN128140 Crocosphaera watsonii wh 8501 44.9936628643853 789.0 observed 1 1
GN128959 Crocosphaera watsonii wh 8501 44.1176470588235 1122.0 observed 1 0
GN129611 Crocosphaera watsonii wh 8501 44.9709060681629 1203.0 observed 1 0
HB437427 Crocosphaera watsonii wh 8501 48.0916030534351 393.0 observed 1 1
HB439450 Crocosphaera watsonii wh 8501 42.7558257345491 987.0 observed 1 1
HB443586 Crocosphaera watsonii wh 8501 41.5468856947296 1461.0 observed 1 0
HB653954 Crocosphaera watsonii wh 8501 44.2379182156134 1614.0 observed 1 0
HB654980 Crocosphaera watsonii wh 8501 42.5387596899225 1032.0 observed 1 0
HB655436 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
HB661504 Crocosphaera watsonii wh 8501 44.2379182156134 1614.0 observed 1 0
HB662088 Crocosphaera watsonii wh 8501 41.8779342723005 1065.0 observed 1 0
HB663313 Crocosphaera watsonii wh 8501 37.979797979798 495.0 observed 1 0
HB665183 Crocosphaera watsonii wh 8501 42.5387596899225 1032.0 observed 1 0
HB665791 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
HB670232 Crocosphaera watsonii wh 8501 41.8779342723005 1065.0 observed 1 0
HB678078 Crocosphaera watsonii wh 8501 46.9043151969981 1599.0 observed 1 0
HB683038 Crocosphaera watsonii wh 8501 41.8779342723005 1065.0 observed 1 0
HB687528 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
HB698552 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
HB702269 Crocosphaera watsonii wh 8501 40.1709401709402 1521.0 observed 1 0
HB704242 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
HB704419 Crocosphaera watsonii wh 8501 44.0 375.0 observed 1 0
HB706534 Crocosphaera watsonii wh 8501 42.5387596899225 1032.0 observed 1 0
HB707385 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
HB711979 Crocosphaera watsonii wh 8501 37.979797979798 495.0 observed 1 0
HB715221 Crocosphaera watsonii wh 8501 41.738299904489 1047.0 observed 1 0
HB718060 Crocosphaera watsonii wh 8501 43.6412315930388 1494.0 observed 1 0
HB721705 Crocosphaera watsonii wh 8501 41.8779342723005 1065.0 observed 1 0
HB723418 Crocosphaera watsonii wh 8501 40.1709401709402 1521.0 observed 1 0
HB723627 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
HB729196 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
HB738384 Crocosphaera watsonii wh 8501 41.8779342723005 1065.0 observed 1 0
HB739359 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
HB749009 Crocosphaera watsonii wh 8501 42.5387596899225 1032.0 observed 1 0
HB749874 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
HB757474 Crocosphaera watsonii wh 8501 41.8779342723005 1065.0 observed 1 0
HB758478 Crocosphaera watsonii wh 8501 35.0225225225225 888.0 observed 1 0
HB812636 Crocosphaera watsonii wh 8501 37.8694158075601 1455.0 observed 1 1
HB817553 Crocosphaera watsonii wh 8501 42.5387596899225 1032.0 observed 1 0
HB817956 Crocosphaera watsonii wh 8501 40.1709401709402 1521.0 observed 1 0
HB820150 Crocosphaera watsonii wh 8501 44.0 375.0 observed 1 0
HB897732 Crocosphaera watsonii wh 8501 43.5534591194969 636.0 observed 1 1
HB899867 Crocosphaera watsonii wh 8501 38.2694541231127 1722.0 observed 1 1
HB902870 Crocosphaera watsonii wh 8501 38.2694541231127 1722.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
Powered by Datasette · Queries took 3436.41ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT