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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

21 rows where Sequence_status = "predicted" and Species_name = "Artemia salina"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
FU572058 Artemia salina 59.0673575129534 193.0 predicted 1 1
GC336017 Artemia salina 46.5940054495913 367.0 predicted 1 1
GP231975 Artemia salina 38.4057971014493 414.0 predicted 1 1
GP231976 Artemia salina 37.6190476190476 420.0 predicted 1 1
GP232475 Artemia salina 39.63133640553 434.0 predicted 1 1
GP233428 Artemia salina 46.0048426150121 413.0 predicted 1 1
GP233910 Artemia salina 39.119804400978 409.0 predicted 1 1
GP234165 Artemia salina 40.8602150537634 372.0 predicted 1 1
LF450964 Artemia salina 61.4155251141553 438.0 predicted 1 1
LF450967 Artemia salina 58.0246913580247 324.0 predicted 1 1
LF486362 Artemia salina 50.4566210045662 438.0 predicted 1 1
LF486365 Artemia salina 46.6049382716049 324.0 predicted 1 1
LF521760 Artemia salina 59.3607305936073 438.0 predicted 1 1
LF521763 Artemia salina 56.7901234567901 324.0 predicted 1 1
LF557158 Artemia salina 50.4566210045662 438.0 predicted 1 1
LF557161 Artemia salina 46.2962962962963 324.0 predicted 1 1
LF592556 Artemia salina 47.2602739726027 438.0 predicted 1 1
LF592559 Artemia salina 45.0617283950617 324.0 predicted 1 1
MV333482 Artemia salina 50.7900677200903 443.0 predicted 1 1
MX548125 Artemia salina 50.1650165016502 303.0 predicted 1 1
MX548126 Artemia salina 49.8360655737705 305.0 predicted 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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