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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

21 rows where Sequence_status = "predicted" and Species_name = "Balaenoptera omurai"

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These facets timed out: Sequence_status, Is_annotated

Species_name 1

  • Balaenoptera omurai · 21 ✖

Is_protein_coding_sequence 1

  • 1 21
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
HL237964 Balaenoptera omurai 58.4474885844749 438.0 predicted 1 1
HL237965 Balaenoptera omurai 58.5301837270341 381.0 predicted 1 1
HL237966 Balaenoptera omurai 60.6451612903226 465.0 predicted 1 1
HL237967 Balaenoptera omurai 58.1395348837209 387.0 predicted 1 1
HL242451 Balaenoptera omurai 45.8904109589041 438.0 predicted 1 1
HL242452 Balaenoptera omurai 43.3070866141732 381.0 predicted 1 1
HL242453 Balaenoptera omurai 50.3225806451613 465.0 predicted 1 1
HL242454 Balaenoptera omurai 45.2196382428941 387.0 predicted 1 1
HL246938 Balaenoptera omurai 54.1095890410959 438.0 predicted 1 1
HL246939 Balaenoptera omurai 54.0682414698163 381.0 predicted 1 1
HL246940 Balaenoptera omurai 56.3440860215054 465.0 predicted 1 1
HL246941 Balaenoptera omurai 53.7467700258398 387.0 predicted 1 1
HL251425 Balaenoptera omurai 45.662100456621 438.0 predicted 1 1
HL251426 Balaenoptera omurai 46.9816272965879 381.0 predicted 1 1
HL251427 Balaenoptera omurai 50.5376344086022 465.0 predicted 1 1
HL251428 Balaenoptera omurai 46.5116279069767 387.0 predicted 1 1
HL255912 Balaenoptera omurai 45.662100456621 438.0 predicted 1 1
HL255913 Balaenoptera omurai 44.6194225721785 381.0 predicted 1 1
HL255914 Balaenoptera omurai 45.5913978494624 465.0 predicted 1 1
HL255915 Balaenoptera omurai 45.7364341085271 387.0 predicted 1 1
MO909583 Balaenoptera omurai 48.3870967741936 155.0 predicted 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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