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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

83 rows where Sequence_status = "predicted" and Species_name = "Pseudoalteromonas caenipelagi"

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These facets timed out: Sequence_status, Is_annotated, Species_name

Is_protein_coding_sequence 1

  • 1 83
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
CQ827485 Pseudoalteromonas caenipelagi 59.4968553459119 795.0 predicted 1 1
CQ827486 Pseudoalteromonas caenipelagi 59.4968553459119 795.0 predicted 1 1
CQ827487 Pseudoalteromonas caenipelagi 59.4968553459119 795.0 predicted 1 1
CQ827488 Pseudoalteromonas caenipelagi 59.4968553459119 795.0 predicted 1 1
CQ827489 Pseudoalteromonas caenipelagi 59.3710691823899 795.0 predicted 1 1
CQ827490 Pseudoalteromonas caenipelagi 59.4968553459119 795.0 predicted 1 1
CQ827491 Pseudoalteromonas caenipelagi 59.2452830188679 795.0 predicted 1 1
CQ827492 Pseudoalteromonas caenipelagi 59.3710691823899 795.0 predicted 1 1
CQ827493 Pseudoalteromonas caenipelagi 59.2452830188679 795.0 predicted 1 1
CQ827494 Pseudoalteromonas caenipelagi 59.4968553459119 795.0 predicted 1 1
CQ827495 Pseudoalteromonas caenipelagi 59.4968553459119 795.0 predicted 1 1
CQ827496 Pseudoalteromonas caenipelagi 59.4968553459119 795.0 predicted 1 1
DD052482 Pseudoalteromonas caenipelagi 54.7169811320755 795.0 predicted 1 1
EA932974 Pseudoalteromonas caenipelagi 49.8442367601246 321.0 predicted 1 1
EA932994 Pseudoalteromonas caenipelagi 50.0 322.0 predicted 1 1
HJ974414 Pseudoalteromonas caenipelagi 60.2272727272727 264.0 predicted 1 1
HK144683 Pseudoalteromonas caenipelagi 59.4968553459119 795.0 predicted 1 1
HK144684 Pseudoalteromonas caenipelagi 59.3710691823899 795.0 predicted 1 1
HK144685 Pseudoalteromonas caenipelagi 59.3710691823899 795.0 predicted 1 1
HK144686 Pseudoalteromonas caenipelagi 59.3710691823899 795.0 predicted 1 1
HK144699 Pseudoalteromonas caenipelagi 59.3710691823899 795.0 predicted 1 1
HK150438 Pseudoalteromonas caenipelagi 49.8442367601246 321.0 predicted 1 1
HK460804 Pseudoalteromonas caenipelagi 51.5151515151515 330.0 predicted 1 1
HK513699 Pseudoalteromonas caenipelagi 62.962962962963 972.0 predicted 1 1
HK513719 Pseudoalteromonas caenipelagi 63.1851085832472 967.0 predicted 1 1
HK513759 Pseudoalteromonas caenipelagi 63.5270541082164 998.0 predicted 1 1
HK513779 Pseudoalteromonas caenipelagi 63.3761105626851 1013.0 predicted 1 1
HK548185 Pseudoalteromonas caenipelagi 50.1557632398754 321.0 predicted 1 1
HK692639 Pseudoalteromonas caenipelagi 49.8442367601246 321.0 predicted 1 1
HK692643 Pseudoalteromonas caenipelagi 50.1557632398754 321.0 predicted 1 1
HK692645 Pseudoalteromonas caenipelagi 50.3105590062112 322.0 predicted 1 1
HK692711 Pseudoalteromonas caenipelagi 50.6211180124224 322.0 predicted 1 1
HL483468 Pseudoalteromonas caenipelagi 49.8257839721254 287.0 predicted 1 1
HL484516 Pseudoalteromonas caenipelagi 50.4615384615385 325.0 predicted 1 1
HV312661 Pseudoalteromonas caenipelagi 50.3105590062112 322.0 predicted 1 1
HV769926 Pseudoalteromonas caenipelagi 50.6172839506173 324.0 predicted 1 1
HV769931 Pseudoalteromonas caenipelagi 50.1557632398754 321.0 predicted 1 1
HV769933 Pseudoalteromonas caenipelagi 49.8442367601246 321.0 predicted 1 1
HW533966 Pseudoalteromonas caenipelagi 49.8442367601246 321.0 predicted 1 1
HW914282 Pseudoalteromonas caenipelagi 55.6451612903226 372.0 predicted 1 1
HW914283 Pseudoalteromonas caenipelagi 49.5327102803738 321.0 predicted 1 1
HW914284 Pseudoalteromonas caenipelagi 55.6451612903226 372.0 predicted 1 1
HW914285 Pseudoalteromonas caenipelagi 49.5327102803738 321.0 predicted 1 1
HW914286 Pseudoalteromonas caenipelagi 55.3763440860215 372.0 predicted 1 1
KH282660 Pseudoalteromonas caenipelagi 50.3086419753086 324.0 predicted 1 1
KH308165 Pseudoalteromonas caenipelagi 50.7788161993769 321.0 predicted 1 1
KH308172 Pseudoalteromonas caenipelagi 50.1557632398754 321.0 predicted 1 1
LF650243 Pseudoalteromonas caenipelagi 50.7788161993769 321.0 predicted 1 1
LF650291 Pseudoalteromonas caenipelagi 50.7788161993769 321.0 predicted 1 1
LG106725 Pseudoalteromonas caenipelagi 49.6913580246914 324.0 predicted 1 1
LG106899 Pseudoalteromonas caenipelagi 50.9259259259259 324.0 predicted 1 1
LG106903 Pseudoalteromonas caenipelagi 50.0 324.0 predicted 1 1
LP846273 Pseudoalteromonas caenipelagi 62.8482972136223 969.0 predicted 1 1
LP955036 Pseudoalteromonas caenipelagi 49.2211838006231 321.0 predicted 1 1
LP955244 Pseudoalteromonas caenipelagi 49.5327102803738 321.0 predicted 1 1
LP957962 Pseudoalteromonas caenipelagi 50.4672897196262 321.0 predicted 1 1
LQ830531 Pseudoalteromonas caenipelagi 50.1557632398754 321.0 predicted 1 1
LQ880530 Pseudoalteromonas caenipelagi 50.1557632398754 321.0 predicted 1 1
LY523608 Pseudoalteromonas caenipelagi 50.1557632398754 321.0 predicted 1 1
LY524216 Pseudoalteromonas caenipelagi 49.0740740740741 324.0 predicted 1 1
LY524728 Pseudoalteromonas caenipelagi 49.6913580246914 324.0 predicted 1 1
LY526208 Pseudoalteromonas caenipelagi 50.4587155963303 327.0 predicted 1 1
LY526440 Pseudoalteromonas caenipelagi 50.0 324.0 predicted 1 1
LY526472 Pseudoalteromonas caenipelagi 50.0 324.0 predicted 1 1
LY667154 Pseudoalteromonas caenipelagi 64.3159379407616 2127.0 predicted 1 1
LY667165 Pseudoalteromonas caenipelagi 64.2857142857143 2184.0 predicted 1 1
LZ243575 Pseudoalteromonas caenipelagi 61.7176128093159 687.0 predicted 1 1
MA784750 Pseudoalteromonas caenipelagi 62.6543209876543 972.0 predicted 1 1
MM781522 Pseudoalteromonas caenipelagi 50.0 324.0 predicted 1 1
MP407672 Pseudoalteromonas caenipelagi 64.4859813084112 321.0 predicted 1 1
MP407797 Pseudoalteromonas caenipelagi 64.1744548286604 321.0 predicted 1 1
MP407804 Pseudoalteromonas caenipelagi 64.4859813084112 321.0 predicted 1 1
MP750869 Pseudoalteromonas caenipelagi 59.2452830188679 795.0 predicted 1 1
MP805165 Pseudoalteromonas caenipelagi 50.1557632398754 321.0 predicted 1 1
MP805167 Pseudoalteromonas caenipelagi 49.8442367601246 321.0 predicted 1 1
MP805746 Pseudoalteromonas caenipelagi 50.7788161993769 321.0 predicted 1 1
MP900944 Pseudoalteromonas caenipelagi 61.9047619047619 672.0 predicted 1 1
MQ115406 Pseudoalteromonas caenipelagi 58.5669781931464 321.0 predicted 1 1
MQ160479 Pseudoalteromonas caenipelagi 50.1557632398754 321.0 predicted 1 1
MQ259927 Pseudoalteromonas caenipelagi 57.0093457943925 321.0 predicted 1 1
MY610520 Pseudoalteromonas caenipelagi 56.2264150943396 795.0 predicted 1 1
OF021152 Pseudoalteromonas caenipelagi 49.8442367601246 321.0 predicted 1 1
PA064371 Pseudoalteromonas caenipelagi 49.3827160493827 324.0 predicted 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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