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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

40 rows where Species_name = "Acaryochloris marina"

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Suggested facets: GC_content

These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated

Species_name 1

  • Acaryochloris marina · 40 ✖
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
DI356802 Acaryochloris marina 50.2824858757062 708.0 observed 1 1
DI356803 Acaryochloris marina 44.9925261584454 669.0 observed 1 1
DI356804 Acaryochloris marina 48.0122324159021 654.0 observed 1 1
DI359625 Acaryochloris marina 50.2824858757062 708.0 observed 1 0
DI359626 Acaryochloris marina 44.9925261584454 669.0 observed 1 0
DI359627 Acaryochloris marina 48.0122324159021 654.0 observed 1 0
DI359901 Acaryochloris marina 50.2824858757062 708.0 observed 1 0
DI359902 Acaryochloris marina 44.9925261584454 669.0 observed 1 0
DI359903 Acaryochloris marina 48.0122324159021 654.0 observed 1 0
DI360177 Acaryochloris marina 50.2824858757062 708.0 observed 1 0
DI360178 Acaryochloris marina 44.9925261584454 669.0 observed 1 0
DI360179 Acaryochloris marina 48.0122324159021 654.0 observed 1 0
DI360453 Acaryochloris marina 50.2824858757062 708.0 observed 1 0
DI360454 Acaryochloris marina 44.9925261584454 669.0 observed 1 0
DI360455 Acaryochloris marina 48.0122324159021 654.0 observed 1 0
HC196088 Acaryochloris marina 45.1149425287356 696.0 observed 1 0
HC196854 Acaryochloris marina 45.1149425287356 696.0 observed 1 0
HC508043 Acaryochloris marina 51.0083036773428 1686.0 observed 1 1
HC508955 Acaryochloris marina 51.0083036773428 1686.0 observed 1 0
HC509654 Acaryochloris marina 51.0083036773428 1686.0 observed 1 0
HH802765 Acaryochloris marina 50.9350935093509 909.0 observed 1 1
HZ531055 Acaryochloris marina 45.1149425287356 696.0 observed 1 1
JD593979 Acaryochloris marina 34.7222222222222 72.0 observed 0 0
LF401313 Acaryochloris marina 45.9737827715356 1068.0 observed 1 1
LF401314 Acaryochloris marina 48.4507042253521 1065.0 observed 1 1
LF401449 Acaryochloris marina 45.9737827715356 1068.0 observed 1 0
LF401450 Acaryochloris marina 48.4507042253521 1065.0 observed 1 0
LG095050 Acaryochloris marina 45.1149425287356 696.0 observed 1 0
LG135293 Acaryochloris marina 45.1149425287356 696.0 observed 1 0
LG135342 Acaryochloris marina 45.1149425287356 696.0 observed 1 0
LQ215619 Acaryochloris marina 45.1149425287356 696.0 observed 1 0
LQ297290 Acaryochloris marina 45.1149425287356 696.0 observed 1 0
LQ309234 Acaryochloris marina 45.9737827715356 1068.0 observed 1 0
LQ309235 Acaryochloris marina 48.4507042253521 1065.0 observed 1 0
LQ310225 Acaryochloris marina 45.9737827715356 1068.0 observed 1 0
LQ310226 Acaryochloris marina 48.4507042253521 1065.0 observed 1 0
LQ310389 Acaryochloris marina 45.9737827715356 1068.0 observed 1 0
LQ310390 Acaryochloris marina 48.4507042253521 1065.0 observed 1 0
MS987527 Acaryochloris marina 51.2996941896024 2616.0 observed 1 1
OF062729 Acaryochloris marina 34.7222222222222 72.0 observed 0 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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