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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

23 rows where Species_name = "Aequorea"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
BD430420 Aequorea 38.6871508379888 716.0 observed 1 0
CS026429 Aequorea 38.6871508379888 716.0 observed 1 1
FW343413 Aequorea 61.5277777777778 720.0 observed 1 0
GM037667 Aequorea 38.2045929018789 958.0 observed 0 0
GM037668 Aequorea 42.3011844331641 591.0 observed 1 0
GM037669 Aequorea 42.8087986463621 591.0 observed 1 0
GM037670 Aequorea 42.8087986463621 591.0 observed 1 0
GM037671 Aequorea 42.6807760141093 567.0 observed 1 0
GM037672 Aequorea 42.687074829932 588.0 observed 1 0
GM037673 Aequorea 42.687074829932 588.0 observed 1 0
GM037674 Aequorea 42.687074829932 588.0 observed 1 0
GM037675 Aequorea 42.3280423280423 567.0 observed 1 0
HV097596 Aequorea 38.2045929018789 958.0 observed 0 0
HV097597 Aequorea 42.3011844331641 591.0 observed 1 0
HV097598 Aequorea 42.8087986463621 591.0 observed 1 0
HV097599 Aequorea 42.8087986463621 591.0 observed 1 0
HV097600 Aequorea 42.6807760141093 567.0 observed 1 0
HV097601 Aequorea 42.687074829932 588.0 observed 1 0
HV097602 Aequorea 42.687074829932 588.0 observed 1 0
HV097603 Aequorea 42.687074829932 588.0 observed 1 0
HV097604 Aequorea 42.3280423280423 567.0 observed 1 0
LY269347 Aequorea 61.5277777777778 720.0 observed 1 0
MB021429 Aequorea 61.5277777777778 720.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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