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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

588 rows where Species_name = "Anabaena sp. ybs01"

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Species_name 1

  • Anabaena sp. ybs01 · 588 ✖

Sequence_status 1

  • predicted 588

Is_protein_coding_sequence 1

  • 1 588

Is_annotated 1

  • 1 588
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
BD105471 Anabaena sp. ybs01 45.7635009310987 2148.0 predicted 1 1
DD461454 Anabaena sp. ybs01 36.3013698630137 438.0 predicted 1 1
DI194175 Anabaena sp. ybs01 41.5199258572752 3237.0 predicted 1 1
DM295634 Anabaena sp. ybs01 45.1158106747231 993.0 predicted 1 1
EA310350 Anabaena sp. ybs01 33.8481338481338 777.0 predicted 1 1
FU594372 Anabaena sp. ybs01 39.8119122257053 957.0 predicted 1 1
GV146140 Anabaena sp. ybs01 45.2083333333333 2400.0 predicted 1 1
GZ036246 Anabaena sp. ybs01 45.0807635829662 681.0 predicted 1 1
HB447895 Anabaena sp. ybs01 47.0899470899471 1134.0 predicted 1 1
HI550031 Anabaena sp. ybs01 45.6238361266294 1611.0 predicted 1 1
HI550033 Anabaena sp. ybs01 44.9410304158908 1611.0 predicted 1 1
HI659234 Anabaena sp. ybs01 42.8696412948381 1143.0 predicted 1 1
HI659706 Anabaena sp. ybs01 43.0059523809524 672.0 predicted 1 1
HI659707 Anabaena sp. ybs01 44.3055555555556 720.0 predicted 1 1
HI659778 Anabaena sp. ybs01 45.5823293172691 498.0 predicted 1 1
HI660818 Anabaena sp. ybs01 46.1859979101358 957.0 predicted 1 1
HI660967 Anabaena sp. ybs01 39.6280400572246 2097.0 predicted 1 1
HI661684 Anabaena sp. ybs01 44.1340782122905 1074.0 predicted 1 1
HI662102 Anabaena sp. ybs01 47.28555917481 1842.0 predicted 1 1
HI662104 Anabaena sp. ybs01 46.9528351881293 1887.0 predicted 1 1
HI662106 Anabaena sp. ybs01 44.0385591070523 1971.0 predicted 1 1
HI662107 Anabaena sp. ybs01 45.6140350877193 1938.0 predicted 1 1
HI662256 Anabaena sp. ybs01 48.2661004953999 1413.0 predicted 1 1
HI662389 Anabaena sp. ybs01 38.8888888888889 630.0 predicted 1 1
HI662582 Anabaena sp. ybs01 47.4702380952381 1344.0 predicted 1 1
HI663733 Anabaena sp. ybs01 36.1111111111111 324.0 predicted 1 1
HI663810 Anabaena sp. ybs01 45.6349206349206 756.0 predicted 1 1
HI664447 Anabaena sp. ybs01 41.9213973799127 687.0 predicted 1 1
HI664448 Anabaena sp. ybs01 44.4444444444444 729.0 predicted 1 1
HI664449 Anabaena sp. ybs01 45.1443569553806 762.0 predicted 1 1
HI664450 Anabaena sp. ybs01 43.0962343096234 717.0 predicted 1 1
HI665254 Anabaena sp. ybs01 43.3898305084746 885.0 predicted 1 1
HI665648 Anabaena sp. ybs01 41.0041841004184 717.0 predicted 1 1
HI666933 Anabaena sp. ybs01 43.6559139784946 930.0 predicted 1 1
HI667240 Anabaena sp. ybs01 42.3976608187134 2052.0 predicted 1 1
HI669119 Anabaena sp. ybs01 36.2530413625304 411.0 predicted 1 1
HI671022 Anabaena sp. ybs01 41.1960132890365 903.0 predicted 1 1
HI672394 Anabaena sp. ybs01 47.6041666666667 960.0 predicted 1 1
HI672398 Anabaena sp. ybs01 44.7179487179487 975.0 predicted 1 1
HI672399 Anabaena sp. ybs01 47.4558670820353 963.0 predicted 1 1
HI673897 Anabaena sp. ybs01 41.8685121107266 867.0 predicted 1 1
HI673898 Anabaena sp. ybs01 39.6424815983176 951.0 predicted 1 1
HI674552 Anabaena sp. ybs01 45.5038759689922 1290.0 predicted 1 1
HI674553 Anabaena sp. ybs01 44.6932006633499 1206.0 predicted 1 1
HI675008 Anabaena sp. ybs01 43.4891905480141 1989.0 predicted 1 1
HI675377 Anabaena sp. ybs01 43.5534591194969 636.0 predicted 1 1
HI675426 Anabaena sp. ybs01 43.0817610062893 636.0 predicted 1 1
HI675993 Anabaena sp. ybs01 44.0789473684211 456.0 predicted 1 1
HI676434 Anabaena sp. ybs01 43.8315539739027 1686.0 predicted 1 1
HI676467 Anabaena sp. ybs01 43.8908659549229 1686.0 predicted 1 1
HI676763 Anabaena sp. ybs01 42.1171171171171 888.0 predicted 1 1
HI677118 Anabaena sp. ybs01 46.0154241645244 1167.0 predicted 1 1
HI677497 Anabaena sp. ybs01 42.2885572139303 1809.0 predicted 1 1
HI678525 Anabaena sp. ybs01 46.2840323767476 1359.0 predicted 1 1
HI678666 Anabaena sp. ybs01 42.5976385104451 1101.0 predicted 1 1
HI678777 Anabaena sp. ybs01 43.2334241598547 1101.0 predicted 1 1
HI679089 Anabaena sp. ybs01 45.7746478873239 426.0 predicted 1 1
HI679192 Anabaena sp. ybs01 44.7712418300654 612.0 predicted 1 1
HI679338 Anabaena sp. ybs01 42.3267326732673 1212.0 predicted 1 1
HI679401 Anabaena sp. ybs01 47.7950713359274 1542.0 predicted 1 1
HI679402 Anabaena sp. ybs01 46.6042154566745 1281.0 predicted 1 1
HI679594 Anabaena sp. ybs01 46.9945355191257 1281.0 predicted 1 1
HI679595 Anabaena sp. ybs01 47.8599221789883 1542.0 predicted 1 1
HI680211 Anabaena sp. ybs01 44.0 1050.0 predicted 1 1
HI680518 Anabaena sp. ybs01 45.3662182361734 1338.0 predicted 1 1
HI680629 Anabaena sp. ybs01 43.9005439005439 1287.0 predicted 1 1
HI680630 Anabaena sp. ybs01 45.5421686746988 1245.0 predicted 1 1
HI681619 Anabaena sp. ybs01 43.6026936026936 1188.0 predicted 1 1
HI681792 Anabaena sp. ybs01 33.8235294117647 1224.0 predicted 1 1
HI681794 Anabaena sp. ybs01 44.0203562340967 1179.0 predicted 1 1
HI682816 Anabaena sp. ybs01 46.3514302393462 1713.0 predicted 1 1
HI682817 Anabaena sp. ybs01 46.2028985507246 1725.0 predicted 1 1
HI682818 Anabaena sp. ybs01 45.3177257525084 1794.0 predicted 1 1
HI682819 Anabaena sp. ybs01 45.4022988505747 1740.0 predicted 1 1
HI682820 Anabaena sp. ybs01 41.7677642980936 1731.0 predicted 1 1
HI682932 Anabaena sp. ybs01 48.895292987512 1041.0 predicted 1 1
HI683061 Anabaena sp. ybs01 48.5110470701249 1041.0 predicted 1 1
HI683204 Anabaena sp. ybs01 42.8571428571428 882.0 predicted 1 1
HI684305 Anabaena sp. ybs01 41.0780669144982 1614.0 predicted 1 1
HI684358 Anabaena sp. ybs01 41.3878562577447 1614.0 predicted 1 1
HI685097 Anabaena sp. ybs01 47.4680757375605 2271.0 predicted 1 1
HI685229 Anabaena sp. ybs01 47.1598414795244 2271.0 predicted 1 1
HI691241 Anabaena sp. ybs01 42.7728613569322 339.0 predicted 1 1
HI692253 Anabaena sp. ybs01 44.9921752738654 1278.0 predicted 1 1
HI692587 Anabaena sp. ybs01 44.2691903259727 951.0 predicted 1 1
HI692758 Anabaena sp. ybs01 43.8438438438438 999.0 predicted 1 1
HI692759 Anabaena sp. ybs01 43.7434279705573 951.0 predicted 1 1
HI692819 Anabaena sp. ybs01 44.1147378832839 1011.0 predicted 1 1
HI693474 Anabaena sp. ybs01 43.5786435786436 693.0 predicted 1 1
HI693550 Anabaena sp. ybs01 43.801652892562 726.0 predicted 1 1
HI693716 Anabaena sp. ybs01 42.0833333333333 240.0 predicted 1 1
HI694532 Anabaena sp. ybs01 43.30900243309 822.0 predicted 1 1
HI694533 Anabaena sp. ybs01 43.1873479318735 822.0 predicted 1 1
HI694868 Anabaena sp. ybs01 45.309381237525 1503.0 predicted 1 1
HI694917 Anabaena sp. ybs01 45.5755156353959 1503.0 predicted 1 1
HI695316 Anabaena sp. ybs01 42.4603174603175 504.0 predicted 1 1
HI695356 Anabaena sp. ybs01 43.9759036144578 498.0 predicted 1 1
HI696276 Anabaena sp. ybs01 43.3898305084746 885.0 predicted 1 1
HI696945 Anabaena sp. ybs01 45.9613196814562 879.0 predicted 1 1
HI697311 Anabaena sp. ybs01 45.9672337744171 3174.0 predicted 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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