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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

588 rows where Species_name = "Anabaena sp. ybs01"

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These facets timed out: Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_status 1

  • predicted 488
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
HI698387 Anabaena sp. ybs01 41.869918699187 492.0 predicted 1 1
HI698736 Anabaena sp. ybs01 43.256464011181 1431.0 predicted 1 1
HI698741 Anabaena sp. ybs01 47.7257298031229 1473.0 predicted 1 1
HI698802 Anabaena sp. ybs01 41.1965811965812 1170.0 predicted 1 1
HI698837 Anabaena sp. ybs01 41.5384615384615 1170.0 predicted 1 1
HI699459 Anabaena sp. ybs01 46.5804066543438 1623.0 predicted 1 1
HI699996 Anabaena sp. ybs01 43.9340400471143 849.0 predicted 1 1
HI701103 Anabaena sp. ybs01 42.0316301703163 1644.0 predicted 1 1
HI701104 Anabaena sp. ybs01 47.288046340179 1899.0 predicted 1 1
HI922886 Anabaena sp. ybs01 45.8119658119658 1170.0 predicted 1 1
HI922887 Anabaena sp. ybs01 45.7389428263215 927.0 predicted 1 1
HI923668 Anabaena sp. ybs01 42.1875 1152.0 predicted 1 1
HI924617 Anabaena sp. ybs01 45.9948320413437 774.0 predicted 1 1
HI924621 Anabaena sp. ybs01 41.9501133786848 882.0 predicted 1 1
HI924914 Anabaena sp. ybs01 49.6598639455782 735.0 predicted 1 1
HI924923 Anabaena sp. ybs01 42.002442002442 819.0 predicted 1 1
HI925903 Anabaena sp. ybs01 46.343779677113 1053.0 predicted 1 1
HI929803 Anabaena sp. ybs01 47.2735893788525 2109.0 predicted 1 1
HI930021 Anabaena sp. ybs01 46.2304409672831 2109.0 predicted 1 1
HI930613 Anabaena sp. ybs01 47.2309299895507 1914.0 predicted 1 1
HI930973 Anabaena sp. ybs01 42.4628450106157 471.0 predicted 1 1
HI933051 Anabaena sp. ybs01 45.1666666666667 1200.0 predicted 1 1
HI934416 Anabaena sp. ybs01 43.5643564356436 606.0 predicted 1 1
HI934497 Anabaena sp. ybs01 42.9042904290429 606.0 predicted 1 1
HI934638 Anabaena sp. ybs01 39.0243902439024 246.0 predicted 1 1
HI935103 Anabaena sp. ybs01 46.3906581740977 942.0 predicted 1 1
HI936491 Anabaena sp. ybs01 43.6472346786248 669.0 predicted 1 1
HI936790 Anabaena sp. ybs01 43.5802469135802 810.0 predicted 1 1
HI937529 Anabaena sp. ybs01 44.5175438596491 2736.0 predicted 1 1
HI937531 Anabaena sp. ybs01 45.4484605087015 2988.0 predicted 1 1
HI937534 Anabaena sp. ybs01 47.9471120389701 2874.0 predicted 1 1
HJ179752 Anabaena sp. ybs01 41.2429378531073 885.0 predicted 1 1
HJ398472 Anabaena sp. ybs01 44.7257383966245 711.0 predicted 1 1
HJ398473 Anabaena sp. ybs01 45.4289732770745 711.0 predicted 1 1
HJ978485 Anabaena sp. ybs01 43.6032863849765 1704.0 predicted 1 1
HK080235 Anabaena sp. ybs01 45.9277917716205 1191.0 predicted 1 1
HK080283 Anabaena sp. ybs01 47.0193115029387 1191.0 predicted 1 1
HK080962 Anabaena sp. ybs01 48.3368719037509 1413.0 predicted 1 1
HK081044 Anabaena sp. ybs01 48.1953290870488 1413.0 predicted 1 1
HK081564 Anabaena sp. ybs01 46.5959328028294 1131.0 predicted 1 1
HK081844 Anabaena sp. ybs01 47.6270240089336 1791.0 predicted 1 1
HK081964 Anabaena sp. ybs01 48.0737018425461 1791.0 predicted 1 1
HK082015 Anabaena sp. ybs01 47.7945281965382 1791.0 predicted 1 1
HK082782 Anabaena sp. ybs01 47.1321695760599 1203.0 predicted 1 1
HK082783 Anabaena sp. ybs01 46.5502909393184 1203.0 predicted 1 1
HK082967 Anabaena sp. ybs01 41.3223140495868 726.0 predicted 1 1
HK083008 Anabaena sp. ybs01 42.8374655647383 726.0 predicted 1 1
HK083626 Anabaena sp. ybs01 41.5620641562064 717.0 predicted 1 1
HK083668 Anabaena sp. ybs01 43.3751743375174 717.0 predicted 1 1
HK083877 Anabaena sp. ybs01 41.4141414141414 792.0 predicted 1 1
HK083890 Anabaena sp. ybs01 41.7929292929293 792.0 predicted 1 1
HK083937 Anabaena sp. ybs01 46.3254593175853 762.0 predicted 1 1
HK084042 Anabaena sp. ybs01 45.6692913385827 762.0 predicted 1 1
HK084043 Anabaena sp. ybs01 49.003984063745 753.0 predicted 1 1
HK084044 Anabaena sp. ybs01 43.0555555555556 720.0 predicted 1 1
HK084495 Anabaena sp. ybs01 47.039897039897 1554.0 predicted 1 1
HK084508 Anabaena sp. ybs01 46.1221122112211 1212.0 predicted 1 1
HK084551 Anabaena sp. ybs01 46.039603960396 1212.0 predicted 1 1
HK084607 Anabaena sp. ybs01 48.4256243213898 921.0 predicted 1 1
HK084646 Anabaena sp. ybs01 47.4484256243214 921.0 predicted 1 1
HK084647 Anabaena sp. ybs01 45.8515283842795 687.0 predicted 1 1
HK084713 Anabaena sp. ybs01 40.7557354925776 741.0 predicted 1 1
HK084717 Anabaena sp. ybs01 42.5101214574899 741.0 predicted 1 1
HK084726 Anabaena sp. ybs01 42.3857868020305 1182.0 predicted 1 1
HK084727 Anabaena sp. ybs01 40.9897292250233 1071.0 predicted 1 1
HK084757 Anabaena sp. ybs01 41.9465977605512 1161.0 predicted 1 1
HK084758 Anabaena sp. ybs01 42.5549915397631 1182.0 predicted 1 1
HK084899 Anabaena sp. ybs01 47.9384003974168 2013.0 predicted 1 1
HK085077 Anabaena sp. ybs01 48.2539682539683 1890.0 predicted 1 1
HK085078 Anabaena sp. ybs01 47.8887232985594 2013.0 predicted 1 1
HK085631 Anabaena sp. ybs01 45.0904392764858 774.0 predicted 1 1
HK085632 Anabaena sp. ybs01 45.7364341085271 774.0 predicted 1 1
HK128839 Anabaena sp. ybs01 48.5008818342152 1701.0 predicted 1 1
HK128840 Anabaena sp. ybs01 46.6312056737589 1692.0 predicted 1 1
HK134380 Anabaena sp. ybs01 46.723044397463 1419.0 predicted 1 1
HK134381 Anabaena sp. ybs01 46.3706835799859 1419.0 predicted 1 1
HK134388 Anabaena sp. ybs01 45.3488372093023 1290.0 predicted 1 1
HK134389 Anabaena sp. ybs01 45.1937984496124 1290.0 predicted 1 1
HK149631 Anabaena sp. ybs01 41.8103448275862 696.0 predicted 1 1
HK149644 Anabaena sp. ybs01 42.5287356321839 696.0 predicted 1 1
HK149661 Anabaena sp. ybs01 42.9411764705882 1020.0 predicted 1 1
HK149663 Anabaena sp. ybs01 43.6274509803922 1020.0 predicted 1 1
HK167401 Anabaena sp. ybs01 44.8179271708683 714.0 predicted 1 1
HK189930 Anabaena sp. ybs01 46.9353484466835 2382.0 predicted 1 1
HK196767 Anabaena sp. ybs01 46.4052287581699 612.0 predicted 1 1
HK286899 Anabaena sp. ybs01 44.7674418604651 516.0 predicted 1 1
HK286935 Anabaena sp. ybs01 44.1860465116279 516.0 predicted 1 1
HK287069 Anabaena sp. ybs01 45.7657657657658 1110.0 predicted 1 1
HK287166 Anabaena sp. ybs01 46.4894342194956 1467.0 predicted 1 1
HK287190 Anabaena sp. ybs01 46.4212678936605 1467.0 predicted 1 1
HK287362 Anabaena sp. ybs01 38.1078691423519 1131.0 predicted 1 1
HK287484 Anabaena sp. ybs01 37.7541998231653 1131.0 predicted 1 1
HK287677 Anabaena sp. ybs01 43.6085626911315 1635.0 predicted 1 1
HK288185 Anabaena sp. ybs01 45.5384615384615 2925.0 predicted 1 1
HK288427 Anabaena sp. ybs01 44.4444444444444 990.0 predicted 1 1
HK288562 Anabaena sp. ybs01 44.9956483899043 1149.0 predicted 1 1
HK288612 Anabaena sp. ybs01 45.5178416013925 1149.0 predicted 1 1
HK290222 Anabaena sp. ybs01 48.7232574189096 1449.0 predicted 1 1
HK292251 Anabaena sp. ybs01 41.6184971098266 519.0 predicted 1 1
HK293209 Anabaena sp. ybs01 45.2651515151515 528.0 predicted 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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