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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

14 rows where Species_name = "Anemonia manjano"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated

Species_name 1

  • Anemonia manjano · 14 ✖
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
AX172850 Anemonia manjano 46.231884057971 690.0 observed 1 0
AX207711 Anemonia manjano 46.231884057971 690.0 observed 1 0
AX233577 Anemonia manjano 46.231884057971 690.0 observed 1 0
AX686878 Anemonia manjano 46.7248908296943 687.0 observed 1 0
BD349424 Anemonia manjano 46.231884057971 690.0 observed 1 0
BD374378 Anemonia manjano 46.231884057971 690.0 observed 1 0
DD104693 Anemonia manjano 46.7248908296943 687.0 observed 1 0
DJ380372 Anemonia manjano 46.231884057971 690.0 observed 1 1
DM205499 Anemonia manjano 46.7248908296943 687.0 observed 1 0
HW364780 Anemonia manjano 46.7248908296943 687.0 observed 1 1
LQ408077 Anemonia manjano 58.9855072463768 690.0 observed 1 1
LV582366 Anemonia manjano 46.7248908296943 687.0 observed 1 0
MA164284 Anemonia manjano 46.7248908296943 687.0 observed 1 0
MP468511 Anemonia manjano 63.1884057971015 690.0 observed 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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