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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

18 rows where Species_name = "Archaeoglobus veneficus"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
AX555715 Archaeoglobus veneficus 55.5555555555556 27.0 observed 0 0
AX555716 Archaeoglobus veneficus 51.8518518518519 27.0 observed 0 0
AX555717 Archaeoglobus veneficus 46.4285714285714 28.0 observed 0 0
AX555718 Archaeoglobus veneficus 55.5555555555556 27.0 observed 0 0
AX555771 Archaeoglobus veneficus 46.875 32.0 observed 0 0
AX555772 Archaeoglobus veneficus 57.5757575757576 33.0 observed 0 0
AX555773 Archaeoglobus veneficus 54.0540540540541 37.0 observed 0 0
AX555774 Archaeoglobus veneficus 48.5742379547689 1017.0 observed 1 0
AX698716 Archaeoglobus veneficus 48.5742379547689 1017.0 observed 1 0
DD135627 Archaeoglobus veneficus 55.5555555555556 27.0 observed 0 0
DD135628 Archaeoglobus veneficus 51.8518518518519 27.0 observed 0 0
DD135629 Archaeoglobus veneficus 46.4285714285714 28.0 observed 0 0
DD135630 Archaeoglobus veneficus 55.5555555555556 27.0 observed 0 0
DD146438 Archaeoglobus veneficus 48.5742379547689 1017.0 observed 1 1
DM374724 Archaeoglobus veneficus 48.5742379547689 1017.0 observed 1 0
HI070958 Archaeoglobus veneficus 41.6983523447402 789.0 observed 1 0
LY710365 Archaeoglobus veneficus 45.7777777777778 675.0 observed 1 1
MP052707 Archaeoglobus veneficus 45.7777777777778 675.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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