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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

80 rows where Species_name = "Cenarchaeum symbiosum"

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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name

Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
BD250981 Cenarchaeum symbiosum 55.4821504333596 32998.0 observed 0 0
BD250982 Cenarchaeum symbiosum 58.5737179487179 42432.0 observed 0 0
BD250983 Cenarchaeum symbiosum 60.4568576638833 10419.0 observed 1 1
BD250984 Cenarchaeum symbiosum 62.7594627594628 819.0 observed 1 1
BD250985 Cenarchaeum symbiosum 63.6711281070746 1569.0 observed 1 1
BD250986 Cenarchaeum symbiosum 61.7142857142857 1575.0 observed 1 1
BD250987 Cenarchaeum symbiosum 44.6327683615819 885.0 observed 1 1
BD250988 Cenarchaeum symbiosum 61.6091954022989 1305.0 observed 1 1
BD250989 Cenarchaeum symbiosum 60.6617647058824 816.0 observed 1 1
BD250990 Cenarchaeum symbiosum 61.6379310344828 696.0 observed 1 1
BD250991 Cenarchaeum symbiosum 58.7301587301587 378.0 observed 1 1
BD250992 Cenarchaeum symbiosum 60.1666666666667 600.0 observed 1 1
BD250993 Cenarchaeum symbiosum 62.7160493827161 810.0 observed 1 1
BD250994 Cenarchaeum symbiosum 65.5913978494624 837.0 observed 1 0
BD250995 Cenarchaeum symbiosum 64.2987249544627 549.0 observed 1 1
BD250996 Cenarchaeum symbiosum 56.5680473372781 2535.0 observed 1 1
BD250997 Cenarchaeum symbiosum 61.0810810810811 555.0 observed 1 1
BD250998 Cenarchaeum symbiosum 60.702451954937 1509.0 observed 1 1
BD250999 Cenarchaeum symbiosum 54.9751243781095 402.0 observed 1 1
BD251000 Cenarchaeum symbiosum 62.457337883959 879.0 observed 1 1
BD251001 Cenarchaeum symbiosum 58.7131367292225 1119.0 observed 1 1
BD251002 Cenarchaeum symbiosum 58.2655826558266 1107.0 observed 1 1
BD251003 Cenarchaeum symbiosum 43.8370846730975 933.0 observed 1 1
BD251004 Cenarchaeum symbiosum 59.7701149425287 1305.0 observed 1 1
BD251005 Cenarchaeum symbiosum 62.3296158612144 807.0 observed 1 1
BD251006 Cenarchaeum symbiosum 59.6045197740113 708.0 observed 1 1
BD251007 Cenarchaeum symbiosum 57.9365079365079 378.0 observed 1 1
BD251008 Cenarchaeum symbiosum 54.4554455445545 606.0 observed 1 1
BD251009 Cenarchaeum symbiosum 58.3941605839416 822.0 observed 1 1
BD251010 Cenarchaeum symbiosum 62.6307922272048 669.0 observed 1 1
BD251011 Cenarchaeum symbiosum 60.2914389799636 549.0 observed 1 1
BD251012 Cenarchaeum symbiosum 55.6737588652482 2538.0 observed 1 1
BD251013 Cenarchaeum symbiosum 58.411214953271 642.0 observed 1 1
BD251014 Cenarchaeum symbiosum 58.3333333333333 1512.0 observed 1 1
BD251015 Cenarchaeum symbiosum 56.989247311828 279.0 observed 1 1
BD251016 Cenarchaeum symbiosum 56.2189054726368 402.0 observed 1 1
BD251017 Cenarchaeum symbiosum 62.2298065984073 879.0 observed 1 1
BD251018 Cenarchaeum symbiosum 59.3317033414833 1227.0 observed 1 1
BD251019 Cenarchaeum symbiosum 59.6100278551532 1077.0 observed 1 1
BD251020 Cenarchaeum symbiosum 60.4700854700855 468.0 observed 1 1
BD251021 Cenarchaeum symbiosum 58.9657110736369 1779.0 observed 1 1
BD251022 Cenarchaeum symbiosum 57.5 40.0 observed 0 0
BD251023 Cenarchaeum symbiosum 55.0 40.0 observed 0 0
BD251024 Cenarchaeum symbiosum 60.9756097560976 41.0 observed 0 0
BD251025 Cenarchaeum symbiosum 53.6585365853659 41.0 observed 0 0
BD251026 Cenarchaeum symbiosum 50.0 42.0 observed 0 0
BD251027 Cenarchaeum symbiosum 54.7619047619048 42.0 observed 0 0
BD251028 Cenarchaeum symbiosum 50.0 42.0 observed 0 0
BD251029 Cenarchaeum symbiosum 50.0 42.0 observed 0 0
BD251030 Cenarchaeum symbiosum 51.1627906976744 43.0 observed 0 0
BD251031 Cenarchaeum symbiosum 51.1627906976744 43.0 observed 0 0
BD251033 Cenarchaeum symbiosum 55.8139534883721 43.0 observed 0 0
BD251034 Cenarchaeum symbiosum 53.4883720930233 43.0 observed 0 0
BD251035 Cenarchaeum symbiosum 53.4883720930233 43.0 observed 0 0
BD251036 Cenarchaeum symbiosum 58.1395348837209 43.0 observed 0 0
BD251037 Cenarchaeum symbiosum 65.1162790697674 43.0 observed 0 0
BD251038 Cenarchaeum symbiosum 59.0909090909091 44.0 observed 0 0
BD251039 Cenarchaeum symbiosum 62.7906976744186 43.0 observed 0 0
BD251040 Cenarchaeum symbiosum 64.2857142857143 42.0 observed 0 0
BD251041 Cenarchaeum symbiosum 58.1395348837209 43.0 observed 0 0
BD251042 Cenarchaeum symbiosum 45.4545454545455 44.0 observed 0 0
BD251043 Cenarchaeum symbiosum 52.2727272727273 44.0 observed 0 0
BD251044 Cenarchaeum symbiosum 63.6363636363636 44.0 observed 0 0
BD251045 Cenarchaeum symbiosum 64.4444444444444 45.0 observed 0 0
BD251046 Cenarchaeum symbiosum 66.6666666666667 51.0 observed 0 0
BD251047 Cenarchaeum symbiosum 65.9574468085106 47.0 observed 0 0
BD251048 Cenarchaeum symbiosum 36.6666666666667 60.0 observed 0 0
BD251049 Cenarchaeum symbiosum 35.0 60.0 observed 0 0
BD251050 Cenarchaeum symbiosum 53.7313432835821 67.0 observed 0 0
BD251051 Cenarchaeum symbiosum 62.1212121212121 66.0 observed 0 0
BD251052 Cenarchaeum symbiosum 61.1570247933884 121.0 observed 0 0
BD251053 Cenarchaeum symbiosum 57.1428571428571 98.0 observed 0 0
BD251054 Cenarchaeum symbiosum 43.6440677966102 236.0 observed 0 0
BD251055 Cenarchaeum symbiosum 44.6808510638298 235.0 observed 0 0
GN128300 Cenarchaeum symbiosum 64.8922686945501 789.0 observed 1 1
HB438318 Cenarchaeum symbiosum 58.7239583333333 768.0 observed 1 1
HC496584 Cenarchaeum symbiosum 54.5279383429672 1038.0 observed 1 1
HW800176 Cenarchaeum symbiosum 56.2745098039216 510.0 observed 1 0
HW800177 Cenarchaeum symbiosum 58.7002096436059 1431.0 observed 1 1
HW800178 Cenarchaeum symbiosum 59.4961240310078 1548.0 observed 1 1

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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