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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

29 rows where Species_name = "Chlorarachnion"

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These facets timed out: Sequence_status, Species_name

Is_protein_coding_sequence 2

  • 0 16
  • 1 13

Is_annotated 2

  • 0 25
  • 1 4
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
FB335862 Chlorarachnion 46.6666666666667 465.0 observed 1 1
HB899167 Chlorarachnion 47.5524475524476 1001.0 observed 0 0
HB905182 Chlorarachnion 49.7175141242938 708.0 observed 1 1
HB907426 Chlorarachnion 48.4560570071259 1263.0 observed 1 1
HB910014 Chlorarachnion 47.5524475524476 1001.0 observed 0 0
HB921895 Chlorarachnion 49.7175141242938 708.0 observed 1 0
HB932138 Chlorarachnion 47.5524475524476 1001.0 observed 0 0
HB948917 Chlorarachnion 47.5524475524476 1001.0 observed 0 0
HB951014 Chlorarachnion 49.7175141242938 708.0 observed 1 0
HB953648 Chlorarachnion 47.5524475524476 1001.0 observed 0 0
HB956979 Chlorarachnion 47.5524475524476 1001.0 observed 0 0
HB957844 Chlorarachnion 55.7152635181383 1461.0 observed 1 1
HB964744 Chlorarachnion 48.4560570071259 1263.0 observed 1 0
HC893671 Chlorarachnion 49.8446239900559 1609.0 observed 0 0
HC896422 Chlorarachnion 49.8446239900559 1609.0 observed 0 0
HC900420 Chlorarachnion 53.75 1680.0 observed 0 0
HC910622 Chlorarachnion 49.8446239900559 1609.0 observed 0 0
HC956576 Chlorarachnion 47.5524475524476 1001.0 observed 0 0
HC962591 Chlorarachnion 49.7175141242938 708.0 observed 1 0
HC964835 Chlorarachnion 48.4560570071259 1263.0 observed 1 0
HC967423 Chlorarachnion 47.5524475524476 1001.0 observed 0 0
HC979304 Chlorarachnion 49.7175141242938 708.0 observed 1 0
HC989547 Chlorarachnion 47.5524475524476 1001.0 observed 0 0
HD006327 Chlorarachnion 47.5524475524476 1001.0 observed 0 0
HD008424 Chlorarachnion 49.7175141242938 708.0 observed 1 0
HD011058 Chlorarachnion 47.5524475524476 1001.0 observed 0 0
HD014389 Chlorarachnion 47.5524475524476 1001.0 observed 0 0
HD015254 Chlorarachnion 55.7152635181383 1461.0 observed 1 0
HD022154 Chlorarachnion 48.4560570071259 1263.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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