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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

22 rows where Species_name = "Conus arenatus"

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Suggested facets: GC_content, Sequence_length

Is_protein_coding_sequence 2

  • 0 20
  • 1 2

Species_name 1

  • Conus arenatus · 22 ✖

Sequence_status 1

  • observed 22

Is_annotated 1

  • 0 22
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
BD261473 Conus arenatus 52.317880794702 151.0 observed 0 0
BD261474 Conus arenatus 51.5873015873016 126.0 observed 0 0
BD261475 Conus arenatus 51.6556291390729 151.0 observed 0 0
BD261476 Conus arenatus 54.0540540540541 148.0 observed 0 0
BD261477 Conus arenatus 52.317880794702 151.0 observed 0 0
BD280190 Conus arenatus 45.8823529411765 340.0 observed 0 0
DD012684 Conus arenatus 46.4396284829721 323.0 observed 0 0
DD012685 Conus arenatus 47.8527607361963 326.0 observed 0 0
DD012686 Conus arenatus 48.1927710843374 332.0 observed 0 0
DD012687 Conus arenatus 45.4819277108434 332.0 observed 0 0
DD012688 Conus arenatus 47.9695431472081 394.0 observed 0 0
DD012689 Conus arenatus 44.6376811594203 345.0 observed 0 0
DD012690 Conus arenatus 47.2049689440994 322.0 observed 0 0
DD012691 Conus arenatus 47.7987421383648 318.0 observed 0 0
DJ379482 Conus arenatus 45.8823529411765 340.0 observed 0 0
DJ379483 Conus arenatus 48.3985765124555 281.0 observed 1 0
DJ379484 Conus arenatus 47.7351916376307 287.0 observed 1 0
FB300123 Conus arenatus 52.317880794702 151.0 observed 0 0
FB300125 Conus arenatus 51.5873015873016 126.0 observed 0 0
FB300127 Conus arenatus 51.6556291390729 151.0 observed 0 0
FB300129 Conus arenatus 54.0540540540541 148.0 observed 0 0
FB300131 Conus arenatus 52.317880794702 151.0 observed 0 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
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